Query= MSMg01no400_g22.b1 MSMg01no400_g22.b1 CHROMAT_FILE:
MSMg01no400_g22.b1 PHD_FILE: MSMg01no400_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:44 2005
(410 letters)
>mm_chr10_14355205_14356014
Length = 810
Score = 770 bits (398), Expect = 0.0
Identities = 407/410 (99%)
Strand = Plus / Minus
Query: 1 aacagggagatgtgaatcatagaattttcaattacattttttttgtcaaagcagtggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aacagggagatgtgaatcatagaattttcaattacattttttttgtcaaagcagtggcct 551
Query: 61 atgccaatactttggaggggaatcccatgcctcttaatcctcctcaaccaagatggtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atgccaatactttggaggggaatcccatgcctcttaatcctcctcaaccaagatggtcta 491
Query: 121 ttcggttttgctggctgctgattagttaacatcctggcctgcacttagcaagtttgctgc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 490 ttcggttttgctggctgctgattagttaacatcctggtctgcacttagcaagtttgctgc 431
Query: 181 caccagactagctccccagcccttactgtccttaccttaacaaaaatacttcctgcaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caccagactagctccccagcccttactgtccttaccttaacaaaaatacttcctgcaaat 371
Query: 241 atgagtgctgtagcattaaatgacataaaatagcattctatttgttggtgacagaattag 300
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 370 atgagtgctgtagcagtaaatgatataaaatagcattctatttgttggtgacagaattag 311
Query: 301 tttatagtggccattgatttttaattggtctaatttcattactctaataaaggatatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttatagtggccattgatttttaattggtctaatttcattactctaataaaggatatgga 251
Query: 361 ttctcataatattaaagaaaatcttcaggagttcatctttgctaaggtgg 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttctcataatattaaagaaaatcttcaggagttcatctttgctaaggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_g22.g1 MSMg01no400_g22.g1 CHROMAT_FILE:
MSMg01no400_g22.g1 PHD_FILE: MSMg01no400_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:44 2005
(360 letters)
>mm_chr10_14174655_14175414
Length = 760
Score = 630 bits (326), Expect = 0.0
Identities = 350/358 (97%), Gaps = 4/358 (1%)
Strand = Plus / Plus
Query: 2 tctttgtcagaagaaactgaaaccactaacttcaaattgcacatggctatgcatgtgatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tctttgtcagaagaaactgaaaccactaacttcaaattgcacatggctatgcatgtgatc 261
Query: 62 tgtatgtgcagcagaactataaagacacctggctttttctctactggtttcttaaaagat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgtatgtgcagcagaactataaagacacctggctttttctctactggtttcttaaaagat 321
Query: 122 gtaactgccacctttgtaaa-gtatggttagcaccaacagaaaaatacaaatggagaaaa 180
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtaactgccaccttt-taaaagtatggttagcaccaacagaaaaatacaaatggagaaaa 380
Query: 181 aagggcagtctatactggaaattacttgcaattttgtctttcaaaaattggggctccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagggcagtctatactggaaattacttgcaattttgtctttcaaaaattggggctccaag 440
Query: 241 tggagctcagaggcgggcacttacctaacgcgtggaaccctggagttaagcacagacccc 300
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tggaactcagaggcgggcacttgcctaacgcgtggaaccctggagttaagcacagccccc 500
Query: 301 c-accccaataaaaaaaaaaaaacaaacccttggtgacttactgaaaacgcatgctaa 357
| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaccccaataaaaaaaacaaa-caaacccttggtgacttactgaaaacgcatgctaa 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
