Query= MSMg01no401_l16.b1 MSMg01no401_l16.b1 CHROMAT_FILE:
MSMg01no401_l16.b1 PHD_FILE: MSMg01no401_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:25 2005
(583 letters)
>mm_chr10_112755623_112756605
Length = 983
Score = 1029 bits (532), Expect = 0.0
Identities = 563/580 (97%), Gaps = 11/580 (1%)
Strand = Plus / Minus
Query: 1 tggtagggactgcacccaagaagttttgcattattatatttgtctacaggtacaaattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tggtagggactgcacccaagaagttttgcattattatatttgtctacaggtacaaattgt 600
Query: 61 tgcacagctaatggcttatattaacatctcttatcaccttctgtgtctgcatgcctgaca 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgcacagttaatggcttatattaacatctcttatcaccttctgtgtctgcatgcctgaca 540
Query: 121 gacaatggaagtctcactggcacaaaattccagtgctgacaagactatgggtctttctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gacaatggaagtctcactggcacaaaattccagtgctgacaagactatgggtctttctga 480
Query: 181 aatgcctaagaggaaccccattctttatgaattctggattctactctatatacttttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aatgcctaagaggaaccccattctttatgaattctggattctactctatatacttttgtt 420
Query: 241 cattgatcttctcctcccacagccttcacagcaaacaataacgcagtcctctggtctttc 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 419 cattgatcatctcctcccacagccttcacagcaaacaataacgcagtcctctggcctttc 360
Query: 301 tccaatagctaaacaagaaagggttttaaagacatatatgactatgttgtgtatacgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tccaatagctaaacaagaaagggttttaaagacatatatgactatgttgtgtatacgtat 300
Query: 361 ataatgcacattagtctacatgtttcatgatccttagtttcacatttgccaaccctcctt 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ataatgcacattaatctacatgtttcatgatccttagtttcacatttgccaaccctcctt 240
Query: 421 tagggtgcatggtaccacattaaacattacaaggataaaaattcagaaaagtcaccacta 480
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 239 cagggtgcatggtaccacattaaacattacaaggat-----------aaagtcaccacta 191
Query: 481 ccttaaatacttaagcatttttatgatgtaaactttatgattctataaccacaaacatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 190 ccttaaatacttaagcatttttatgatgtaaactttatgattctataaccacaaacaaga 131
Query: 541 ggtagattttcttggatatttattccaccatgagaatcag 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggtagattttcttggatatttattccaccatgagaatcag 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_l16.g1 MSMg01no401_l16.g1 CHROMAT_FILE:
MSMg01no401_l16.g1 PHD_FILE: MSMg01no401_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:25 2005
(596 letters)
>mm_chr10_112686886_112687881
Length = 996
Score = 1122 bits (580), Expect = 0.0
Identities = 592/596 (99%)
Strand = Plus / Plus
Query: 1 tttctgacctcaagttgtattacaaggtacagcaattaaagtatcatgataaagcatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctgacctcaagttgtattacaaggtacagcaattaaagtatcatgataaagcatgac 260
Query: 61 aaaatgcatacactagtggaacagtacagaaagctagcaaaagataacaaaaacatagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatgcatacactagtggaacagtacagaaagctagcaaaagataacaaaaacatagag 320
Query: 121 tcaactattctacatcaaaagcaaattgaggaggcaattctgtaatattgaatttattgt 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tcaactattctacatcaaaagcaaattgaggaggcaattctataatattgaatttattgt 380
Query: 181 ttagatataatgccaaagaaaataattaaaaataaatctaagtcacctcatcacattaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ttagatataatgccaaagaaaataattaaaaataaatctaagtcacctcatcaaattaaa 440
Query: 241 atttttctgtagagctaatttgttgaaacatcaacaaaagggacgatgttccatggaatg 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 atttttctgtagagctaatttgttgaaacatcagcaaaagggacgatgttccatggaatg 500
Query: 301 ggataaggtatttgtaagtcatatatcctgtaaacagataatatctaaaataagtaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggataaggtatttgtaagtcatatatcctgtaaacagataatatctaaaataagtaagga 560
Query: 361 gcacattttattcatcaataaaaataacctgattaaaatgatcaaagggtctaaatatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcacattttattcatcaataaaaataacctgattaaaatgatcaaagggtctaaatatca 620
Query: 421 tttcctgaggaagcaagtggagaacaggtacagaagacaatgtttagcctccttaattgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcctgaggaagcaagtggagaacaggtacagaagacaatgtttagcctccttaattgt 680
Query: 481 cagtaaaacggaagctattaccccagtgagggttcccctcccactttataagtacaactc 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 cagtaaaacggaagctattaccccagtgagggttcctctcccactttataagtacaactc 740
Query: 541 tggagttaagagatgacaaacgctgctgaggaggacctgggaagaaagaacatgag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggagttaagagatgacaaacgctgctgaggaggacctgggaagaaagaacatgag 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
