TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCCAGAACATCCGC
GGAATTCCATGTGTTATCATGCATACTATATACTATTTTAATAAATACCA
TGGCACATAAGCATAATCCTTTACTAAATTTAGTCGCCCTTTTTCATGTT
CAACCATTTTAACGATCATCAGAGAGTAAGTAGTTTTATAATAACTTTGT
TAAGTACTGGGTCTTTATGATTACTTTATTGTCATTTTACTGGGTCTTAT
GTTAATTTATTGTCATTTTATAAAAATTCAAGCGCACCCTCTAAAGCTGC
TGAAGAAGCAGGCATACATTTGTTTTTGNTTTGTGTCAGCTGGGTGACTC
CTCTATGTACAATGATGCAGTTCAAACAGAGCTCAATATATGATGTGAAC
AAGAAGATAAATCATAGAGCTAGGATTCTAAAAATATACCGTGATTACCT
GCCAGCTCCCTAGGTTTTATCAAATGGAAAAAGCGCATGGTCACAGAATA
CAAATGACCAATTCCAAAGCTGTAGGGTGTTTGACATAAGCTTTGATTTT
TGTGCTGTTTAATGACTGTCTATGATTATATTTTTGGAAGGTAAGTGTAT
ACCATGCTATCTATGCCATGAGAAAGAATTCTCCAGTGGAATTTAAACCT
GCCTTGCCACCTTTTGTTTTTGAACACTGCTTCATTCACACATTACCATG
ATGACACTGCCATTTTGACCCCTCTTGTTCCCAGGATTTTTCTTAATGAG
ATTGACTTACCCN

CGAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTAAGCCTGATAAACAGCTTCAATG
AAGTAGCTGGATATAATATTAATGCAAACAATTTAATGGCCTTTCTGTAC
ACAAAGGATAAACAGACTGAGAAAGAAATTAGGGAAACAACACCCTTCTC
AAAGTCACAAATAATATAAAATAGTTTGGCGTGACTTTAACTAAGGAAGT
GATTGATCTGTATGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAG
ATCTCAGAAGATGGAAAGATATTTCTTGTTCATGGATTGGCAGGATCAAT
ATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAAT
CCCCATCAAAATTCCAAATCAATTCTTCAACAAATTAGAAAGGGCAATCA
GCAGATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTCCTC
AAGGATAAAAGAACCTCTGGTGGAATCATGTTGCCTGACTTAAAGCTGCA
CTAGGGAGCAATTGTGATAAAATCTGCATGGTACTGGTATAGTGACAGAG
AAGTAGACCAATGGAACAGAATTGAAGACCCAGAGATGAACCCACACACC
TATGGTCACTTGATCTTTGANCAGGGAACTAANACCATCCAGTGGAAGAA
AGAACACGTTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGAA
CAAGAATGCCAATTGA

Query= MSMg01no401_l20.b1 MSMg01no401_l20.b1 CHROMAT_FILE:
MSMg01no401_l20.b1 PHD_FILE: MSMg01no401_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:26 2005
         (538 letters)



>mm_chr10_105744745_105745681
          Length = 937

 Score =  942 bits (487), Expect = 0.0
 Identities = 525/538 (97%), Gaps = 1/538 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactatatactattttaataaataccatggcacataagcataatcctttactaaatttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactatatactattttaataaataccatggcacataagcataatcctttactaaatttag 260

                                                                       
Query: 61  tcgccctttttcatgttcaaccattttaacgatcatcagagagtaagtagttttataata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgccctttttcatgttcaaccattttaacgatcatcagagagtaagtagttttataata 320

                                                                       
Query: 121 actttgttaagtactgggtctttatgattactttattgtcattttactgggtcttatgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttgttaagtactgggtctttatgattactttattgtcattttactgggtcttatgtt 380

                                                                       
Query: 181 aatttattgtcattttataaaaattcaagcgcaccctctaaagctgctgaagaagcaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 aatttattgtcattttataaaaattcaagcgcaccctctaaagctgctgcagaagcaggc 440

                                                                       
Query: 241 atacatttgtttttgntttgtgtcagctgggtgactcctctatgtacaatgatgcagttc 300
           |||||||||  |||| ||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 441 atacatttg-ctttgttttgtgtcagctgggtgactcctctgtgtacaacgatgcagttc 499

                                                                       
Query: 301 aaacagagctcaatatatgatgtgaacaagaagataaatcatagagctaggattctaaaa 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 aaacagagctcaatatatgatgtgaacaagaagataaatcatagcgctaggattctaaaa 559

                                                                       
Query: 361 atataccgtgattacctgccagctccctaggttttatcaaatggaaaaagcgcatggtca 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 atataccgtgattacctgccagctccctaggttttatcaaagggaaaaagcgcatggtca 619

                                                                       
Query: 421 cagaatacaaatgaccaattccaaagctgtagggtgtttgacataagctttgatttttgt 480
           |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 620 cagaatacaaatgaccaattccaaagctgtagggtgttcgacatatgctttgatttctgt 679

                                                                     
Query: 481 gctgtttaatgactgtctatgattatatttttggaaggtaagtgtataccatgctatc 538
           ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 680 gctgtttaatgactgtctatgattatatttttggaaggtaaatgtatacgatgctatc 737


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space:   489456
Effective search space used:   489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)