NNGGTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCATACCGAGCC
GCGGAATTCCAGAACTTTCGGAATACACAGAGAAATCCTGTCTCAAACAA
AAACAAAAACAAAAACAAGCTAATATTCCTTATTGCTCCTGTGTAATCTG
AGCAGTGAGCAATATGTGGGCAGGTGACTTGCCTGGCCCTTTATGAAAAG
GTCACCATTTGGGAAATCAAAGTAGAATAAAATAAGGCAAAAAGAGTCCA
AATTCTTGTATCGTTAAAACGTTCTGCTAACACAAAATACAGTGAAACCA
TTCAGCTTTCCAAACATATTTTANAATTACTTAAAATACTGAAGTATTCC
TGAACACTACCCAGTACCTTTCACTAATGATACCATCTACTTGGAAAATC
TCTGACATTTAGTAAACACTACTCAGTAGATTAGCTTCTTCTAGTCATAA
GCTGAACTGTATGTACATATTTATACTCTCCTAAAATACCTGCAAAACAT
ACTAGAGCACAGATCTATGTTAAAGGTAAACACAAGGTAGTTTTCATATA
TGGAAAAACATCACATTGGCATTAACGTCAATTGAAATGTTACTGGTCTT
ATAATAAACATAGAATGTATCAGGAAATCCTCAGGCACTGAGGGAAATAA
ATCAGTGTGTTTGTATTAGGGGCCACTCAGTTACTCAGCATAGGCCCAAC
CGAGCACATCTTTGTTTAAGCAGTCACCTTTACCATTATATGCTTAC

NNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTCAGAGAAATTCTCACCTGAGGAATACCGAATG
GCCGAGAAGCACCTGAAAAAATGTTCAACATCATTAATCATCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCATTAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAA
AGAGGATTACTCCTCCATTGTTGGTGGGATTGCATCTTGTACAACCACTC
TGGATATCAGTCTGGCAGTTCTCNCATAATTTGGACATAGTACTACCGGA
GGATCCGGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCG
GTAAGAAGGACACATGCTCCACTATGTTCATAACACCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATAGATACA
GAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAACAAGA
ATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACCCAATCACCAAGGAACTCGCACAATATGGACTCACT
GATAAGTGGATATTATCCCAGAAACTTAGGATATCCAAGATATAAGATAC
CATTTGGCTATATGCCTGAAATTCAGAAGAATGAAGACCAAAGTGTGGAC
ACN

Query= MSMg01no401_m06.b1 MSMg01no401_m06.b1 CHROMAT_FILE:
MSMg01no401_m06.b1 PHD_FILE: MSMg01no401_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:28 2005
         (578 letters)



>mm_chr10_31311229_31312206
          Length = 978

 Score = 1042 bits (539), Expect = 0.0
 Identities = 568/578 (98%), Gaps = 1/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagaaatcctgtctcaaacaaaaacaaaaacaaaaacaagctaatattccttattgctcc 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 202 gagaaatcctgtctcaaacaaaa-caaaaacaaaaacaagctaatattccttattgctcc 260

                                                                       
Query: 61  tgtgtaatctgagcagtgagcaatatgtgggcaggtgacttgcctggccctttatgaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgtaatctgagcagtgagcaatatgtgggcaggtgacttgcctggccctttatgaaaa 320

                                                                       
Query: 121 ggtcaccatttgggaaatcaaagtagaataaaataaggcaaaaagagtccaaattcttgt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ggtcaccatttgggaaatcaaagtagaataaaataaggcaaaaagagtccaaattcctgt 380

                                                                       
Query: 181 atcgttaaaacgttctgctaacacaaaatacagtgaaaccattcagctttccaaacatat 240
           |  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 381 agagttaaaacgttctgctaacataaaatacagtgaaactattcagctttccaaacatat 440

                                                                       
Query: 241 tttanaattacttaaaatactgaagtattcctgaacactacccagtacctttcactaatg 300
           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttataaatacttaaaatactgaagtattcctgaacactacccagtacctttcactaatg 500

                                                                       
Query: 301 ataccatctacttggaaaatctctgacatttagtaaacactactcagtagattagcttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 ataccatctacttggaaaatctctgacatttagtaaacactactcagtagattggcttct 560

                                                                       
Query: 361 tctagtcataagctgaactgtatgtacatatttatactctcctaaaatacctgcaaaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctagtcataagctgaactgtatgtacatatttatactctcctaaaatacctgcaaaaca 620

                                                                       
Query: 421 tactagagcacagatctatgttaaaggtaaacacaaggtagttttcatatatggaaaaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactagagcacagatctatgttaaaggtaaacacaaggtagttttcatatatggaaaaac 680

                                                                       
Query: 481 atcacattggcattaacgtcaattgaaatgttactggtcttataataaacatagaatgta 540
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcacattggcattaacgccaattgaaatgttactggtcttataataaacatagaatgta 740

                                                 
Query: 541 tcaggaaatcctcaggcactgagggaaataaatcagtg 578
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaggaaatcctcaggcactgagggaaataaatcagtg 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)