Query= MSMg01no402_d07.b1 MSMg01no402_d07.b1 CHROMAT_FILE:
MSMg01no402_d07.b1 PHD_FILE: MSMg01no402_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:01 2005
(607 letters)
>mm_chr10_113122643_113123649
Length = 1007
Score = 948 bits (490), Expect = 0.0
Identities = 578/610 (94%), Gaps = 11/610 (1%)
Strand = Plus / Plus
Query: 4 ggaattcttgctttattgcgctggtaattatgcatgttcttgactcattattaagactcc 63
||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgctttactgtgctggtaaatatgcatgttcttgactcattattaagactcc 263
Query: 64 atttactgttcagcattcccttagtattattcacaatgattagtttcaactgacatttgt 123
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 atttactattcagcattcccttactattattcacaatgattagtttcaactgacatttgt 323
Query: 124 tcagatttttctctttctatcttctgaatactcaaatctgtagttaaatccattaaatat 183
||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 324 tcagatttttctcattctatcttctgaatactcatatctctagttaaatccattaactat 383
Query: 184 tttatattatatatctcatgacaagaacatctagttagactttttgaagttatttgcatt 243
|||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 384 tttatattatgtctctcatgacaagaacatctatttagactttttgaagtgatttgcatt 443
Query: 244 tcagcattaatgctattaatacatattt-caaatatttatcccagtgatcagtttttgtt 302
|||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||
Sbjct: 444 tcagcattaatgctattaatacatatttacaa-tatgtatccccttgatcagtttttgtt 502
Query: 303 gtcttattgtttcaacaat---gccttatattcttttttcttgttttagtgacttacttc 359
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 503 gtctttttgtttcaacaataatgccttatattcttttt-cttgttttagtgacttacttc 561
Query: 360 ttttactactttaatattaaaatatttaacttagaacatatttctattg--agtacaaaa 417
||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||
Sbjct: 562 ttttactactttaatattaaaatatttaacttagaacgtgtttcta--gcaagtacaaaa 619
Query: 418 atttggtacttgaagaggattctgttttgtcagttttctttgtgtgtttgtattttttta 477
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 aattggtacttgaagaggattctgttttgtcagttttctttgtgtgtttgtatttttt-a 678
Query: 478 tctttatggtttatttctctgttttatgaccttgtgttagaaactggacatgttttataa 537
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 679 tctttatggtttatttctctgttttataaccttgtgttagaaactggacatgttttataa 738
Query: 538 tataatacggctacactagaataccttcacaaagaccattgtcactgatgtatggttcat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tataatacggctacactagaataccttcacaaagaccattgtcactgatgtatggttcat 798
Query: 598 tgtagtttgt 607
||||||||||
Sbjct: 799 tgtagtttgt 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_d07.g1 MSMg01no402_d07.g1 CHROMAT_FILE:
MSMg01no402_d07.g1 PHD_FILE: MSMg01no402_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:01 2005
(193 letters)
>mm_chr10_113143916_113144515
Length = 600
Score = 281 bits (145), Expect = 3e-80
Identities = 181/193 (93%), Gaps = 7/193 (3%)
Strand = Plus / Minus
Query: 5 caacattggtgttgccactaaaactctgctttttggccttgagtaagctctatgttttaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caacattggtgttgcaactaaaactctgctttttggccttgagtaagctctatgttttaa 338
Query: 65 aaattcgcaaatatacagacaaaa-tttctccacctaagtgagataggtgcttcataatt 123
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 337 aaatttgcaaatatacagacaaaactttctccacctaagtgagataggtgcttcataact 278
Query: 124 catggattttggcttggaaggaa-tgaaaac-gcagcaataa-aagttcctgg-gg-ata 178
|||| |||||||||||||||||| |||||| |||||||||| |||||||||| || |||
Sbjct: 277 catgcattttggcttggaaggaaatgaaaaatgcagcaataagaagttcctggtggtata 218
Query: 179 gg-aaaaagctgg 190
|| ||||||||||
Sbjct: 217 ggtaaaaagctgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 600
Length adjustment: 8
Effective length of query: 185
Effective length of database: 592
Effective search space: 109520
Effective search space used: 109520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
