Query= MSMg01no402_m23.b1 MSMg01no402_m23.b1 CHROMAT_FILE:
MSMg01no402_m23.b1 PHD_FILE: MSMg01no402_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:50 2005
(146 letters)
>mm_chr10_24192158_24192703
Length = 546
Score = 275 bits (142), Expect = 1e-78
Identities = 145/146 (99%)
Strand = Plus / Minus
Query: 1 tacattcaatgcaccagggccattataacacaaaacaaaaaatgtttggcttgaagctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tacattcaatgcaccagggccattataacacaaaacaaaaaatgtttggcttgaagctgg 287
Query: 61 agaggtggcttcagtaagtatgagttctggctgcatcaacatgaacccattacttcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agaggtggcttcagtaagtatgagttctggctgcatcaacatgaacccattacttcaaat 227
Query: 121 cctcagcgctcctgtaataaaagaag 146
|||||| |||||||||||||||||||
Sbjct: 226 cctcagtgctcctgtaataaaagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_m23.g1 MSMg01no402_m23.g1 CHROMAT_FILE:
MSMg01no402_m23.g1 PHD_FILE: MSMg01no402_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:50 2005
(466 letters)
>mm_chr10_24040706_24041572
Length = 867
Score = 741 bits (383), Expect = 0.0
Identities = 445/469 (94%), Gaps = 10/469 (2%)
Strand = Plus / Plus
Query: 1 ttatctgactcttactttattcctgtgaaagaggcaggtgacacactcaattaccccata 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 201 ttatctgactcttactttattcctgtgaaagaggcaggtgacacactcacttaccacata 260
Query: 61 tttactaaatatcaacataatcaattagtttattgaatatatcttaattgagagcacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttactaaatatcaacataatcaattagtttattgaatatatcttaattgagagcacaga 320
Query: 121 cagtatcag-aaaaaaattctcaaagttagagatatcgaggttctgctttaagaagagct 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtatcagaaaaaaaattctcaaagttagagatatcgaggttctgctttaagaagagct 380
Query: 180 gtgtgatcccatagacaaccaccaaatccagacactattgcatacgtcagcaagatttt- 238
||||||||||||| || |||| ||||||||||||||||| | ||||||||||||
Sbjct: 381 gtgtgatcccata---aa----caaacccagacactattgcatatgccagcaagattttc 433
Query: 239 ctgacaagaccctgatatagctgtctcttgtgaggctatgccagtgcctggcaaatacag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgacaagaccctgatatagctgtctcttgtgaggctatgccagtgcctggcaaatacag 493
Query: 299 aaatgggtgcttacagtcatctattggataaaacagagggcccccagtgaaggagctaga 358
||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 494 aaatgggtgcttacagttatctattggatggaacagagggcccccagcgaaggagctaga 553
Query: 359 gaaagtacccaaggacctagagggatctgcaaccctataggaggaacagcaatatgaact 418
|||||||||| |||| ||| |||| ||||||||||||||||||||||| |||||||||||
Sbjct: 554 gaaagtaccctaggagctaaaggggtctgcaaccctataggaggaacaacaatatgaact 613
Query: 419 aaccagtaccccc-agagcttgtgtctctagttgcatatgtagcagagg 466
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 614 aaccagtaccccccagagcttgtgtctctagttgcatatgtagcagagg 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 867
Length adjustment: 10
Effective length of query: 456
Effective length of database: 857
Effective search space: 390792
Effective search space used: 390792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
