Query= MSMg01no403_f14.b1 MSMg01no403_f14.b1 CHROMAT_FILE:
MSMg01no403_f14.b1 PHD_FILE: MSMg01no403_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:36 2005
(484 letters)
>mm_chr10_70340317_70341199
Length = 883
Score = 899 bits (465), Expect = 0.0
Identities = 477/481 (99%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 4 gaattctacatcttcatctgaaggcagctagcagaatactgacttctagacaagtaggat 63
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 864 gaattctacatcttcatctgaaggcagctagcagaatactgacttccagacaagtaggat 805
Query: 64 gagggtctgaaagcccatgcctacagtgacacaccttctccaacaaggtcacccttacta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gagggtctgaaagcccatgcctacagtgacacaccttctccaacaaggtcacccttacta 745
Query: 124 cagcaaggccacacctcctagtagtgccactccctaaaccaagcatatttaaatcaacac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cagcaaggccacacctcctagtagtgccactccctaaaccaagcatatttaaatcaacac 685
Query: 184 acagtatggctctctgtgtcagtgacaggaagttccctgaagctcagcagctgctctcgt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acagtatggctctctgtgtcagtgacaggaagttccctgaagctcagcagctgctctcg- 626
Query: 244 ttttcctggaaaagtattaggacacttaaatcattatcttggtggccaaacccaccctgg 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgtcctggaaaagtattaggacacttaaatcattatcttggtggccaaacccaccctgg 566
Query: 304 cagatgacatcatatcttttgtttcctggccaaggaaggagatgggaactttattggaga 363
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 565 cagatgacatcatatcttttgtttcctgggcaaggaaggagatgggaactttattggaga 506
Query: 364 acagagggaggggtccaaaacaaatagtggcccttggtgtaggaagaaccccatgttttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acagagggaggggtccaaaacaaatagtggcccttggtgtaggaagaaccccatgttttc 446
Query: 424 agctgagttagtcctggctttcaaaaattcctggaatggatcaggggaaggaaatgcccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctgagttagtcctggctttcaaaaattcctggaatggatcaggggaaggaaatgcccc 386
Query: 484 a 484
|
Sbjct: 385 a 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 883
Length adjustment: 10
Effective length of query: 474
Effective length of database: 873
Effective search space: 413802
Effective search space used: 413802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_f14.g1 MSMg01no403_f14.g1 CHROMAT_FILE:
MSMg01no403_f14.g1 PHD_FILE: MSMg01no403_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:36 2005
(440 letters)
>mm_chr10_70169360_70170199
Length = 840
Score = 746 bits (386), Expect = 0.0
Identities = 429/448 (95%), Gaps = 8/448 (1%)
Strand = Plus / Plus
Query: 1 caggtaactcttccaagtgtccagtcccaatccaggctaggcgccaggatcctcagcgtc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 193 caggtaactcttccaagtgtccagtcccaatccaggctaggcaccaggatcctcagcgtc 252
Query: 61 ctacgagaagactccccttttacttgaaatatctattaagcagactcctgtttatagagg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctacgagaagactccctttttacttgaaatatctattaagcagactcctgtttatagagg 312
Query: 121 ctcaacaattcacaaattgacatttacagtgagcacattttgactgaatccacctggacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctcaacaattcacaaattgacatttacagtgagcacattttgactgaatccacctggacc 372
Query: 181 tcagtagatccatcaacctgacagtttataagcacacgagcaccttgcagtcctgacttg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 373 tcagtagatccatcaacctgacagtttataagcacacaagcaccttgcagtcctgacttg 432
Query: 241 actgtctgcccttcccagcacttccctgcttccccagaccagataaccttcaccctgtat 300
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 433 actgtctgcccttcccagcacttccctgtttccccagacctgataaccttcaccctgtat 492
Query: 301 ccagcacgctctccttaggatgcaggagtggggtggg--------cagacgacgaaaatg 352
|||||||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 493 tcagcacgctctccttaggatgcaggagtggggggggggggggggcagacgatgaaaatg 552
Query: 353 caatttcatactgcgagttttcagatatccaggtttgtactaagaaggtgagaaattaaa 412
||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 553 caatttcgtactgtgagttttcagatatccaggtttgtactaagaaggtgagaacttaaa 612
Query: 413 ggaacaccctaagtcagtggttctcagc 440
||||||||||||||||||||||||||||
Sbjct: 613 ggaacaccctaagtcagtggttctcagc 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
