Query= MSMg01no403_h01.b1 MSMg01no403_h01.b1 CHROMAT_FILE:
MSMg01no403_h01.b1 PHD_FILE: MSMg01no403_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:44 2005
(559 letters)
>mm_chr10_118329111_118330069
Length = 959
Score = 1029 bits (532), Expect = 0.0
Identities = 544/548 (99%)
Strand = Plus / Minus
Query: 8 gaattcgctcctctccgccatctcccctgttcactccctcagtcctcactccctggcttc 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaattcgctcctctctgccatctcccctgttcactccctcagtcctcactccctggcttc 489
Query: 68 tggcaggatggcctctgggctatacctgagaggacctgacctttgctttagttgttctaa 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tggcaggatggcctctgggctatacctgagaggacctgacctttgctttagttgttctaa 429
Query: 128 tggcctgtatgtccttctactaaaacacacacggggcaaagtatccaatggccacccttt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tggcctgtatgtccttctactaaaacacacacggggcaaagtatccaatggccacccttt 369
Query: 188 cagtaaagtctacctgactgccctatttaacattgcaacttgaacgttattatttctaag 247
|||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 368 cagtaaagtctacctgactgccctatttaacattgcaacttggacattattctttctaag 309
Query: 248 acacaagaataaacaatgcattgaaacttcctctctctcttcttggattctcatgcagac 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acacaagaataaacaatgcattgaaacttcctctctctcttcttggattctcatgcagac 249
Query: 308 tacatctattcagtgaattgtgccccgttcacctaccagtgatttttcagtggacaccaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tacatctattcagtgaattgtgccccgttcacctaccagtgatttttcagtggacaccaa 189
Query: 368 tagggggagttcaatttaatgctgacactaattgaagtaactatggaccctgtagatttc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tagggggagttcaatttaatgctgacactaattgaagtaactatggaccctgtagatttc 129
Query: 428 tcattcagtccctgtgagacttccttccacttcaaatgccaatcatgttcaagattgtga 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tcattcagtccctgtgagacttccttccacttcaaatgccaatcatgttcaagattgtga 69
Query: 488 cccagtgcctctggctagctgcttatatatcatggggaagtccccatgatcttaaactcc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cccagtgcctctggctagctgcttatatatcatggggaagtccccatgatcttaaactcc 9
Query: 548 tgctggat 555
||||||||
Sbjct: 8 tgctggat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_h01.g1 MSMg01no403_h01.g1 CHROMAT_FILE:
MSMg01no403_h01.g1 PHD_FILE: MSMg01no403_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:44 2005
(177 letters)
>mm_chr10_118163348_118163935
Length = 588
Score = 261 bits (135), Expect = 2e-74
Identities = 174/187 (93%), Gaps = 11/187 (5%)
Strand = Plus / Plus
Query: 2 attgttttaaa-caa-ccaggtacatttattctttggtcaggctccatag-gt-gatttg 57
||||||||||| ||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 202 attgttttaaaacaaaccaggtacatttattctttggtcaggctccatagtgttgatttg 261
Query: 58 atctgacagga-ag-ctaaa-tatgcatgattttgcctga-agaggcaaaagaccaacaa 113
||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 262 atctgacaggatagtctaaaatatgcatgattttgcctgagagaggcaaaagaccaacag 321
Query: 114 ttctgtaaccacagctctgg-agtttatg-gc-tgctgacgagattcacttcacattgca 170
|||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||
Sbjct: 322 ttctgtaaccacagctctgggagtttatgtgcatgctgacgagattcgcttcacattgca 381
Query: 171 ttttcca 177
|||||||
Sbjct: 382 ttttcca 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 588
Length adjustment: 8
Effective length of query: 169
Effective length of database: 580
Effective search space: 98020
Effective search space used: 98020
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
