Query= MSMg01no406_g07.b1 MSMg01no406_g07.b1 CHROMAT_FILE:
MSMg01no406_g07.b1 PHD_FILE: MSMg01no406_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:41 2005
(195 letters)
>mm_chr10_107825717_107826308
Length = 592
Score = 290 bits (150), Expect = 3e-83
Identities = 187/206 (90%), Gaps = 16/206 (7%)
Strand = Plus / Minus
Query: 1 cataaaaga-tcccaagcaaaggggct-tactaactttataatgagggacctccgttagt 58
||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 309 cataaaagattcccaagcaaa--ggctctactaactttataatgagggacctccgttagt 252
Query: 59 aactaccagtgactactgttaaacttgacaagtgccctctatgcgtgaactaa-----ct 113
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 251 gactaccagtg---actgttaaacttgacaagtgccctctatgcgtgaactaaccttcct 195
Query: 114 a----tgtatttctctgatcttattcattgatttccatctgtttacacaccggaggacat 169
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 194 aggcttgtatttctctgatcttattcattgatttccatctgcttacacaccggaggacat 135
Query: 170 ctacccctcggcttgtgaggactatg 195
| ||||||||||||||||||||||||
Sbjct: 134 caacccctcggcttgtgaggactatg 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 592
Length adjustment: 8
Effective length of query: 187
Effective length of database: 584
Effective search space: 109208
Effective search space used: 109208
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no406_g07.g1 MSMg01no406_g07.g1 CHROMAT_FILE:
MSMg01no406_g07.g1 PHD_FILE: MSMg01no406_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:41 2005
(242 letters)
>mm_chr10_107661224_107661865
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 1 tgggaacaggtcttgagatggcaaaggaaaggaacagagaagctaacagtggccatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tgggaacaggtcttgagatggcaaaggaaaggaacagagaagctaacagtgaccatgcag 260
Query: 61 agccatgaacccctgccggtgcagaagttggctgcaggacattctgcacatgctttcatt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 agccatgaacccctgccggtgcagaagttggctgcaggacgttctgcacatgctttcatt 320
Query: 121 tcatcctcacctgctctggggtgtttgtttatagttcctgctaaccccattgtacagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatcctcacctgctctggggtgtttgtttatagttcctgctaaccccattgtacagatg 380
Query: 181 aggaactgaagcttggttgctggccaaggtgcaggcagaactgataatgctataggtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaactgaagcttggttgctggccaaggtgcaggcagaactgataatgctataggtctg 440
Query: 241 ct 242
||
Sbjct: 441 ct 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
