NNCCCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCG
CGGAATTCTCAACTGTGCCATAATCAATGGCTGAGAATCACCTGAAAAAA
TGTTCAAAATCCTTAATCAACAGGGAAATGCAAATGAAAGCAAGCCTGAG
ATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACA
GCAGAGGCTGGCAAGGATGTGGAGAAAGAGGAATGCTCCTACATTGCTGG
TGAGATTGCAAACTTGTAATACTATTCTGGAAATTAGTCTGGTGGTTCCT
CAGAAAATTGGACATAGTACTATGGGAAGATCCAGCAATACCTTTCCTGG
GCATGTCCCCAGAAAATGTTCCAACTAGTAATAAGAACACATGCTTCCCT
ATATTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGAAAAGAACCCAG
ATGTCCCTCAACAGAGGAATGGATGCAGAAAATGTGGTACATTTACACAG
TGGAGTACTACTCAGCTATTAAAATCATTGAATTTATGAAATTCTTAGAG
AAATGGATGTATCTGGAGGATATTATCCTGAGTGAGGTAACCCAATCACA
AAAGAACTCACATGATATGTCCTCACTAATAAGTGGATATTAGCCCAGAA
TCTTAGAATACCCAAGGTACAATTTGCCAAACCCATGAAACTCTCGAAAA
ATAAAGACCCAAGGGTGGATACTTCGTTTCCTTCCTAAAATGGG

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATTCTGTAAGATGTCATAGGCAATA
AATATTGTTCACTGATGAATTTGTTCTGATAAAAGTGTATATTTTAATAA
ATGCATTATAAATCTAATAAAATGTAGCTTTTTGTGCAATATATCTGTTT
TCTTTTACCACTCCTGTTCTCTGTCTCTGCTAATCTTAATATTTCAAAAA
ATTGCTTTTATTCATTTATTTGCAGGAGTTTTCAGCTCCTGATCTCTCAC
TTGGGTCTCTCATTTTGATTCTATTTCATCATATTCTATGAGTAAAGTAA
TTAATGTGTACACATATGTGTTTGTGTGTACATAATTATGAAGGGATACA
TGTACTTCTAGACCTGATAGTTCTGCTTACATTTTCATCTTTATATGTGA
CCCACATACTTTTTCTTATGCTATCTATCTCATGAGCTTTGGAATCAGAC
GGTTATATGACTTTTAATGTTTACCTTTTTTTTTGGAAATAGCGTTCTGA
TTATTTGGGGCCTTTGAAATATTAGCAATGAGAATTGACTAATAATACAA
AAGAAATTGTGAGATCATCACTGGCAAGAGATCAATTGTACCATTATCAA
TTCATGGACTTTGTGACTCTTGCTGCATCTGGAGCATCTTCCTGATATTT
TTCCTTTAATTTAATTTTCACTTTAATAACTAAAG

Query= MSMg01no406_p14.g1 MSMg01no406_p14.g1 CHROMAT_FILE:
MSMg01no406_p14.g1 PHD_FILE: MSMg01no406_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:29 2005
         (515 letters)



>mm_chr10_55143643_55144556
          Length = 914

 Score =  949 bits (491), Expect = 0.0
 Identities = 509/515 (98%), Gaps = 1/515 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattctgtaagatgtcataggcaataaatattgttcactgatgaatttgttctgataaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattctgtaagatgtcataggcaataaatattgttcactgatgaatttgttctgataaaa 260

                                                                       
Query: 61  gtgtatattttaataaatgcattataaatctaataaaatgtagctttttgtgcaatatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtatattttaataaatgcattataaatctaataaaatgtagctttttgtgcaatatat 320

                                                                       
Query: 121 ctgttttcttttaccactcctgttctctgtctctgctaatcttaatatttcaaaaaattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttttcttttaccactcctgttctctgtctctgctaatcttaatatttcaaaaaattg 380

                                                                       
Query: 181 cttttattcatttatttgcaggagttttcagctcctgatctctcacttgggtctctcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttattcatttatttgcaggagttttcagctcctgatctctcacttgggtctctcatt 440

                                                                       
Query: 241 ttgattctatttcatcatattctatgagtaaagtaattaatgtgtacacatatgtgtttg 300
           |||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ttgagtcaatttcatcatattctatgagtaaagtaattaatatgtacacatatgtgtttg 500

                                                                       
Query: 301 tgtgtacataattatgaagggatacatgtacttctagacctgatagttctgcttacattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtacataattatgaagggatacatgtacttctagacctgatagttctgcttacattt 560

                                                                       
Query: 361 tcatctttatatgtgacccacatactttttcttatgctatctatctcatgagctttggaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatctttatatgtgacccacatactttttcttatgctatctatctcatgagctttggaa 620

                                                                       
Query: 421 tcagacggttatatgacttttaatgtttacctttttttttggaaatagcgttctgattat 480
           ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 621 tcagacggttatatgacttttaatgtttacctttttttt-ggaaatagtgttctgattat 679

                                              
Query: 481 ttggggcctttgaaatattagcaatgagaattgac 515
           |||||||||||||||||||||||||||||| ||||
Sbjct: 680 ttggggcctttgaaatattagcaatgagaactgac 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 914
Length adjustment: 10
Effective length of query: 505
Effective length of database: 904
Effective search space:   456520
Effective search space used:   456520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)