CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGCTTGTGCATTTAAATGGGGTAGAATGATACAAATGTAAATTTTG
CTAAATTTGGAGTATTAATGAAATTCCGCTATCTGTAGGGATTGTAAGAC
ATTTAGGATTGAGATCAACAGTTTGAGAGTACTATTATTGTTACTAACAA
TATAAAAATGACATGTAAAAGTCTACCCCAAATTCATCTTTTCCCATTCT
CCTTCTGATGGAAATTGATGAATAGCAGAAACTAATATTTAAATAATTGT
CTCACACTCAGTTCTACACATGGTTTAGGGTCCATTCCATGTCTTTTCTA
GAATTTTCTCTGCCTTACTATTGCATCTATCAGCAATTACATCTAAAGCT
TGCCTGGAAATAGCAGCACTGGGCTCACCATCTTTCTAAGCATTTTTGAT
GCAGAATTTCAAAGATTTCACTGAAGACTCTGGCAAATGTTTCAGGAGTC
AGGACCTGTTACTGCTACCATAGTGTTTGTTACTCGGTGTGACAGAGTGA
TGAAAGACGAGGATTTGTGAGTTCCCGATGAAAAGAAGAGCTCATGTTTC
CTGGTTCTTTTTTTCTACAATTTTTTCAGCACTCAAGGTGTCTTAAACTT
TATATGACATTCAACATGCTGTCAAAGTTCACTAGGTGGAACGGATTCTG
GTCACCCTACTAGAATTTGGAACCATGTAGATTGATAGTCTGTANAAG

CAATGAAGTGNGAGGCCTGGCGGCCGCCTTTTCAAACAATTTAGGTGAAC
TATAGATTCCCCGCGGAATTCTGTTTGTGTTCGGGTATGTGGCTGCAACT
GATAACCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACTCTGAGA
TTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAG
CAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGT
GGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTC
AGAAAATTGGATTTTGTACTACCGGAGGATCCAGCAATACCTCTCCTGGG
CATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTA
TGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGA
TGCCCCTCAACCGAGGAATGGATACAGAAAATGTGGTACATCTACACAAT
GGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCA
AATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAA
AGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCATAAC
CTAGGATACCCAGATATAAGATACAATTTCCTTAACACTTGAAACTCTAG
AAAAATGAAGACTGAAGTGTGGAACCTATGCCCCTCCTTAGA

Query= MSMg01no407_c12.b1 MSMg01no407_c12.b1 CHROMAT_FILE:
MSMg01no407_c12.b1 PHD_FILE: MSMg01no407_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:43 2005
         (593 letters)



>mm_chr10_106136920_106137912
          Length = 993

 Score = 1118 bits (578), Expect = 0.0
 Identities = 587/590 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagcttgtgcatttaaatggggtagaatgatacaaatgtaaattttgctaaatt 63
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 204 ggaattcagcttgtgaatttaaatggggtagaatgatacaaatgtaaattttgttaaatt 263

                                                                       
Query: 64  tggagtattaatgaaattccgctatctgtagggattgtaagacatttaggattgagatca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggagtattaatgaaattccgctatctgtagggattgtaagacatttaggattgagatca 323

                                                                       
Query: 124 acagtttgagagtactattattgttactaacaatataaaaatgacatgtaaaagtctacc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagtttgagagtactattattgttactaacaatataaaaatgacatgtaaaagtctacc 383

                                                                       
Query: 184 ccaaattcatcttttcccattctccttctgatggaaattgatgaatagcagaaactaata 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccaaattcatcttttcccattctccttctgatggaaattgatgaatagcagaaactaata 443

                                                                       
Query: 244 tttaaataattgtctcacactcagttctacacatggtttagggtccattccatgtctttt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttaaataattgtctcacactcagttctacacatggtttagggtccattccatgtctttt 503

                                                                       
Query: 304 ctagaattttctctgccttactattgcatctatcagcaattacatctaaagcttgcctgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctagaattttctctgccttactattgcatctatcagcaattacatctaaagcttgcctgg 563

                                                                       
Query: 364 aaatagcagcactgggctcaccatctttctaagcatttttgatgcagaatttcaaagatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaatagcagcactgggctcaccatctttctaagcatttttgatgcagaatttcaaagatt 623

                                                                       
Query: 424 tcactgaagactctggcaaatgtttcaggagtcaggacctgttactgctaccatagtgtt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcactgaagactctggcaaatgtttcaggagtcaggacctgttactgctaccatagtgtt 683

                                                                       
Query: 484 tgttactcggtgtgacagagtgatgaaagacgaggatttgtgagttcccgatgaaaagaa 543
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 684 tgttactcggtgtgacagagtgatgaaagacgaggatttgtgagttcctgatgaaaagaa 743

                                                             
Query: 544 gagctcatgtttcctggttctttttttctacaattttttcagcactcaag 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gagctcatgtttcctggttctttttttctacaattttttcagcactcaag 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)