Query= MSMg01no408_h14.b1 MSMg01no408_h14.b1 CHROMAT_FILE:
MSMg01no408_h14.b1 PHD_FILE: MSMg01no408_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:28 2005
(292 letters)
>mm_chr10_77788827_77789519
Length = 693
Score = 538 bits (278), Expect = e-157
Identities = 289/296 (97%), Gaps = 7/296 (2%)
Strand = Plus / Minus
Query: 1 gctctcaattgtgtctctcagaacaataggggacaatcctctctctggtcatgtgagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gctctcaattgtgtctctcagaacaataggggacaatcctctctctggtcatgtgagtcc 434
Query: 61 tgtagcccaggtgtgttgtcctggtgacaaaggtcgcagacaaagtctgagattgcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgtagcccaggtgtgttgtcctggtgacaaaggtcgcagacaaagtctgagattgcagga 374
Query: 121 agtaagcaggtgctgggtggatgctggaggcccagggtgacctgcaggaacagagaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agtaagcaggtgctgggtggatgctggaggcccagggtgacctgcaggaacagagaaggg 314
Query: 181 gagataggtgaaggctacagaagggttcactgtgtttcgctgtgctgggtggagattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gagataggtgaaggctacagaagggttcactgtgtttcgctgtgctgggtggagattatc 254
Query: 241 tttgtcttctgaa----tttttgtgtgaggggagagcaaagggcacagacatcgcc 292
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 253 tttgtcttctgaagggg---ttgtgtgaggggagagcaaagggcacagacatcgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no408_h14.g1 MSMg01no408_h14.g1 CHROMAT_FILE:
MSMg01no408_h14.g1 PHD_FILE: MSMg01no408_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:28 2005
(279 letters)
>mm_chr10_77638140_77638818
Length = 679
Score = 470 bits (243), Expect = e-137
Identities = 269/283 (95%), Gaps = 12/283 (4%)
Strand = Plus / Plus
Query: 1 ctacaataatagaaaccactctcatctctgcctgtatcaccaactgtgccctcacaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacaataatagaaaccactctcatctctgcctgtatcaccaactgtgccctcacaagga 260
Query: 61 actgacacatggaccctacccacagatgcttccttcagagctaaactcatgtcgggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgacacatggaccctacccacagatgcttccttcagagctaaactcatgtcgggaggg 320
Query: 121 acagggcactgtaaggacccaaagatgtggggcacggaacaacacgcacgcacgcacgca 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagggcactgtaaggacccaaggatgtggggcacggaacaacacgcacgcacgcacgca 380
Query: 181 cgcacgcacgcgagtgttggggggtggagacagctgcaggcagctacaggcctactcaga 240
||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgc--gc--gcgtgtgttggggggtggagacagctgcaggcagctacaggcctactcaga 436
Query: 241 agcctctttta----tattcctgaggcaaacagtatgcagagg 279
|||||| | ||||||||||||||||||||||||||||
Sbjct: 437 agcctc----acccatattcctgaggcaaacagtatgcagagg 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
