Query= MSMg01no408_k15.b1 MSMg01no408_k15.b1 CHROMAT_FILE:
MSMg01no408_k15.b1 PHD_FILE: MSMg01no408_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:42 2005
(454 letters)
>mm_chr10_72797398_72798254
Length = 857
Score = 764 bits (395), Expect = 0.0
Identities = 438/453 (96%), Gaps = 3/453 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcttctagcgaccagaaaagtagccactaaattcaaagcttttagacaaaac 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcttcaagtgaccagaaaagtagccactaaattcaaagcttttagacaaaac 264
Query: 65 caattcaaaaggatttgttctcagcatgtcttgtctcaaagtcataattagcattgctat 124
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caattcaaaacgatttgttttcagcatgtcttgtctcaaagtcataattagcattgctat 324
Query: 125 agcgtttatatcagtctgcatctagcactgtccatgtgtttcaataggaacacagtaatg 184
||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 325 agcatttatatcagtctgcatctagcactgcccatgtgtttcaacaggaacacagtaatg 384
Query: 185 atgtgaaacaagagactggcctcaatgtgtaaacttcacactaatattaacatagttcct 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgtgaaacaagagattggcctcaatgtgtaaacttcacactaatattaacatagttcct 444
Query: 245 aaattctaaataataagtagaacacaatttatggaaccctccttttctatattttagcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaattctaaataataagtagaacacaatttatggaaccctccttttctatattttagcat 504
Query: 305 aatcagttcaactatgacagcatctactctctcttttttt--cttcataattaaactctg 362
|||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||
Sbjct: 505 aatcagttcaactatgacagaatctactctctctttttttttcttcataattgaactctg 564
Query: 363 acttatagaatgccagttagatttttttta-ttagtcatgaaattgaggtaaaattattt 421
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 acttatagaatgccagttagtttttttttaattagtcatgaaattgaggtaaaattattt 624
Query: 422 tttataaaaaaaaaatctacatgtgtatattta 454
|||||||||||||||||||||| ||||||||||
Sbjct: 625 tttataaaaaaaaaatctacatatgtatattta 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 857
Length adjustment: 10
Effective length of query: 444
Effective length of database: 847
Effective search space: 376068
Effective search space used: 376068
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_k15.g1 MSMg01no408_k15.g1 CHROMAT_FILE:
MSMg01no408_k15.g1 PHD_FILE: MSMg01no408_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:43 2005
(495 letters)
>mm_chr10_72957490_72958384
Length = 895
Score = 942 bits (487), Expect = 0.0
Identities = 493/495 (99%)
Strand = Plus / Minus
Query: 1 aaataatctaggctttggacactgttaactttatttctcatttttacattccttaagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aaataatctaggctttggacactgttaactttatttctcatttttacattccttaagttt 636
Query: 61 tgttgatcaaatagtcaaataaaatagttgctgaatttatccaattaagggttaagccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tgttgatcaaatagtcaaataaaatagttgctgaatttatccaattaagggttaagccac 576
Query: 121 agatctaggaattctctcagagaaaaatgtgttccttatttcatagcctactaattagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agatctaggaattctctcagagaaaaatgtgttccttatttcatagcctactaattagca 516
Query: 181 taaaattaaccatgaaaaatgaatgatttaatatgttcataaaggaggtttgtccctttg 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 515 taaaattaaccatgaaaaatgagtgatttaatatgttcataaaggaggtttgtccctttg 456
Query: 241 gcatggtgtctccataggaaggggtgattatagtcttttaattagcacatgccattgtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcatggtgtctccataggaaggggtgattatagtcttttaattagcacatgccattgtga 396
Query: 301 caatagtgtataatatagacaccagaaagtcagaatattttaatgaaatgaagtactcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 caatagtgtataatatagacaccagaaagtcagaatattttaatgaaatgaagtactcct 336
Query: 361 tgatggcataaaaataagaacaaaagcgaagtacatttaaaagttttcagacacaatagg 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 335 tgatggcataaaaataagaacaaaagggaagtacatttaaaagttttcagacacaatagg 276
Query: 421 cctcaaattttattagctttagcccagcaagcaagcacacagatgggtataatgtcagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cctcaaattttattagctttagcccagcaagcaagcacacagatgggtataatgtcagta 216
Query: 481 atttttacagggaaa 495
|||||||||||||||
Sbjct: 215 atttttacagggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
