Query= MSMg01no409_j03.b1 MSMg01no409_j03.b1 CHROMAT_FILE:
MSMg01no409_j03.b1 PHD_FILE: MSMg01no409_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:59 2005
(188 letters)
>mm_chr10_98915269_98915856
Length = 588
Score = 346 bits (179), Expect = e-100
Identities = 182/183 (99%), Gaps = 1/183 (0%)
Strand = Plus / Minus
Query: 4 ggaattccttcaggggacatttggaggttatattggtgtggttaccacggatgtcataaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggaattccttcaggggacatttggaggttatattggtgtggttaccacggatgtcataaa 327
Query: 64 ctttgatagagttctcctctcctgggtctgattgttcctggaaatgagtctccttttatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctttgatagagttctcctctcctgggtctgattgttcctggaaatgagtctccttttatt 267
Query: 124 acagaatagctgtcttaatgaagttatatgaaggagcacacccaatggttttgggttttt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 266 acagaatagctgtcttaatgaagttatatgaaggagcacacccaatggttttgg-ttttt 208
Query: 184 ttt 186
|||
Sbjct: 207 ttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no409_j03.g1 MSMg01no409_j03.g1 CHROMAT_FILE:
MSMg01no409_j03.g1 PHD_FILE: MSMg01no409_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:59 2005
(275 letters)
>mm_chr10_98750581_98751255
Length = 675
Score = 524 bits (271), Expect = e-153
Identities = 274/275 (99%)
Strand = Plus / Plus
Query: 1 tggatcgatgacatcaaactgtgggagccatgtttgcctcgtctgtggtcagcacaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatcgatgacatcaaactgtgggagccatgtttgcctcgtctgtggtcagcacaagct 260
Query: 61 gcacacccacacagctgaccccgttcaacccgcgttcttgggagaattagcatggccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacacccacacagctgaccccgttcaacccgcgttcttgggagaattagcatggccatt 320
Query: 121 gtggcagatgttagagagctgaatggataaaataaataaacctactgccttgggcacatc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggcagatgttagagggctgaatggataaaataaataaacctactgccttgggcacatc 380
Query: 181 ctgaaaccttggttacaatttgcactgccagcaaagaggggttttagactctggttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaaaccttggttacaatttgcactgccagcaaagaggggttttagactctggttaaga 440
Query: 241 aactggtacttgctttgaatgggggtgggtttttt 275
|||||||||||||||||||||||||||||||||||
Sbjct: 441 aactggtacttgctttgaatgggggtgggtttttt 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
