Query= MSMg01no412_a05.b1 MSMg01no412_a05.b1 CHROMAT_FILE:
MSMg01no412_a05.b1 PHD_FILE: MSMg01no412_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:15 2005
(604 letters)
>mm_chr10_69054304_69055306
Length = 1003
Score = 1050 bits (543), Expect = 0.0
Identities = 586/603 (97%), Gaps = 7/603 (1%)
Strand = Plus / Plus
Query: 4 ggaattcatttatt---caggctggaagtagctttttgttctaattctaagctttgcttc 60
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattta--aaacaggctgggagtagctttttgttctaattctaagctttgcttc 261
Query: 61 cttctcttgccatagctccttcttaattctctcttacctaagagttagagccacagtaac 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 262 cttctcttgccatagctccttcttaattctctcttatctaagagttagagccacagtaac 321
Query: 121 aacatgctccagacatattcctgttggccaatactttcttgaggggcagagaagtgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aacatgctccagacatattcctgttggccaatactttcttgaggggcagagaagtgaaaa 381
Query: 181 aaaaaaatcaggttcaaactgattatttgtacttggaaattcctcattatgttgggtcac 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaaa--tcaggttcaaactgattatttgtacttggaaattcctcattatgttgggtcac 439
Query: 241 aatgttttgtgttttatgttaacttgaaacatgtaagagtccttttagtgaagagaatct 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 aatgttttgtgttttatgttaacttgaaacatgcaagagtccttttagtgaagagaatct 499
Query: 301 cacttaagaaaatggtttatcagaatttcctggggccagttttcacataatgattgatct 360
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cacttaagaaaatggcttgtcagaatttcctggggccagttttcacataatgattgatct 559
Query: 361 ggaagggtccagctcactgtgggcggaacaatcccctatgaaaggtggtgctgggttcta 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 560 ggaagggtccagctcactgtgggcggaaccatcccctatgaaaggtggtgctgggttcta 619
Query: 421 tgagaaggcagactgagcaagccatggggagcatgccagtaagcagcactcctccatagc 480
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgagaaagcagactgagcgagccatggggagcatgccagtaagcagcactcctccatagc 679
Query: 481 ctctgccttgttatccatcttcagggtcctgccttgaattcctggcttgcctttccttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctctgccttgttatccatcttcagggtcctgccttgaattcctggcttgcctttccttca 739
Query: 541 gtgataagactgtgatgtggaagtgtaagctgaaataaaccgtttcctcaccatgttgtg 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 740 gtgataagactgtgatgtggaagtgtaagctgaaataaaccttttcctcaccacgttgtg 799
Query: 601 ggg 603
|||
Sbjct: 800 ggg 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1003
Length adjustment: 10
Effective length of query: 594
Effective length of database: 993
Effective search space: 589842
Effective search space used: 589842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_a05.g1 MSMg01no412_a05.g1 CHROMAT_FILE:
MSMg01no412_a05.g1 PHD_FILE: MSMg01no412_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:15 2005
(545 letters)
>mm_chr10_69242827_69243771
Length = 945
Score = 1038 bits (537), Expect = 0.0
Identities = 543/545 (99%)
Strand = Plus / Minus
Query: 1 acactatgaagctctaagcaagagcagcctgtgttatacacgccatacatgtttgaggaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 594 acactatgaagctctaagcaagagcagcctgtgttatacaggccatacatgtttgaggaa 535
Query: 61 gagaggggatggtggcagagaagatcagaggaagactccacacaccaaatggtgccctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gagaggggatggtggcagagaagatcagaggaagactccacacaccaaatggtgccctgt 475
Query: 121 gtgttctccaatgccagacattactttaagggaggggaggagagttcttctctctgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtgttctccaatgccagacattactttaagggaggggaggagagttcttctctctgttgc 415
Query: 181 tcctggattcacacatccttgaagacccagccaacaaatatctagagttctgctcatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcctggattcacacatccttgaagacccagccaacaaatatctagagttctgctcatatt 355
Query: 241 tctattctgtctatcccaagaactagcccctttatactgatgtttagcaactagaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tctattctgtctatcccaagaactagcccctttatactgatgtttagcaactagaggtta 295
Query: 301 tcatttcccaagatgtccgctagcccaactcaagggtcagctacctgtgtcccatggaac 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tcatttctcaagatgtccgctagcccaactcaagggtcagctacctgtgtcccatggaac 235
Query: 361 aaactcaatcatctacaagttgtattctgtcctgcagggtctcatgtggtctaggtgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aaactcaatcatctacaagttgtattctgtcctgcagggtctcatgtggtctaggtgatc 175
Query: 421 ctcaaacttcctgcctagctcagagaaccttgaacttctgattctcctgtctctactctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ctcaaacttcctgcctagctcagagaaccttgaacttctgattctcctgtctctactctc 115
Query: 481 caggttctgggattataggcgtgcaccaccatgccaactttggattttaaatttttattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 caggttctgggattataggcgtgcaccaccatgccaactttggattttaaatttttattt 55
Query: 541 atttg 545
|||||
Sbjct: 54 atttg 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
