Query= MSMg01no414_a13.b1 MSMg01no414_a13.b1 CHROMAT_FILE:
MSMg01no414_a13.b1 PHD_FILE: MSMg01no414_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:54 2005
(594 letters)
>mm_chr10_95386545_95387538
Length = 994
Score = 988 bits (511), Expect = 0.0
Identities = 558/587 (95%), Gaps = 21/587 (3%)
Strand = Plus / Minus
Query: 5 gaattcatccctgatatctatactttttctgtactgttgttgttgttgttgttgttgttg 64
|||||||||||||| || |||||||||||||||| |||||
Sbjct: 875 gaattcatccctgaaatttatactttttctgtac---------------------tgttg 837
Query: 65 ttgttgttgttgtttaaagatttatttattatatgtaagtacactgtagctggctcagac 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ttgttgttgttgtttaaaggtttatttattatatgtaagtacactgtagctggctcagac 777
Query: 125 acttcagaagagggcatccagtcttgttacacatggttgtgagccaccacgtggttgctg 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 776 acttcagaagagggcatccagtcttgttacagatggttgtgagccaccacgtggttgctg 717
Query: 185 ggaattgaactcaggacctccggaagagcagtcagtgctcttaactgctgagccatctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggaattgaactcaggacctccggaagagcagtcagtgctcttaactgctgagccatctct 657
Query: 245 ccaacccttgttgttgttttttaaatccagactttttttattgcttataaaagattcagt 304
|||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 656 ccaacccttgttgttgttttttaaatccagacatatttaattgcttataaaagattcagt 597
Query: 305 atgtttctctagtgcatagaaatttaaggaaaacaagatgataataataataccacaccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atgtttctctagtgcatagaaatttaaggaaaacaagatgataataataataccacaccc 537
Query: 365 ttaaaacagacagttcttcaatatacttcatattcaaattacacttttcttttccttatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttaaaacagacagttcttcaatatacttcatattcaaattacacttttcttttccttatt 477
Query: 425 gataaattttatttataagtaaatggtttgtttgagacaggatctcactgtgtagcccag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gataaattttatttataagtaaatggtttgtttgagacaggatctcactgtgtagcccag 417
Query: 485 gcttgcctcttgaatgctgggatgacaggcatgcacttgactgtcaaatgcccttgatta 544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtttgcctcttgaatgctgggatgacaggcatgcacttgactgtcaaatgcccttgatta 357
Query: 545 tcacaagtgtatgattttagagttctctaaataaaaacaagcacatg 591
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcacaagtgtatgattttagagttctctaaataaaaacaagcacatg 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_a13.g1 MSMg01no414_a13.g1 CHROMAT_FILE:
MSMg01no414_a13.g1 PHD_FILE: MSMg01no414_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:55 2005
(341 letters)
>mm_chr10_95221753_95222496
Length = 744
Score = 590 bits (305), Expect = e-173
Identities = 334/345 (96%), Gaps = 5/345 (1%)
Strand = Plus / Plus
Query: 1 actggagttacagag-aaacaatagacgctctcttccctagcaagtgtctggcacatgtt 59
|||||||||||| || || ||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 201 actggagttaca-agcaagcaatagacgttctctcccctagcaagtggctggcacatgtt 259
Query: 60 tggctcagaatgcctgagaactgtgaagttccagccagtctgtttcatgactgagtccat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggctcagaatgcctgagaactgtgaagttccagccagtctgtttcatgactgagtccat 319
Query: 120 gatcagaaaaaggggccattcccagccccaaattatccaatgcatctttattttatgtct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatcagaaaaaggggccattcccagccccaaattatccaatgcatctttattttatgtct 379
Query: 180 taaaccagcaagatggggaatctggagaagggtcaagtttggtttatgagaaagaagata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaaccagcaagatggggaatctggagaagggtcaagtttggtttatgagaaagaagata 439
Query: 240 ggattttctctaaactggaggaccttaaaaccacctcattgtgtaaatcagcacggcagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggattttctctaaactggaggaccttaaaaccacctcattgtgtaaatcagcacggcagc 499
Query: 300 catttttgcttttttttttttt---ctgcactgagactcttgaat 341
|||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 500 catttttgcttttttttttttttttctgcactgtgtctcttgaat 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 744
Length adjustment: 9
Effective length of query: 332
Effective length of database: 735
Effective search space: 244020
Effective search space used: 244020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
