Query= MSMg01no414_b12.b1 MSMg01no414_b12.b1 CHROMAT_FILE:
MSMg01no414_b12.b1 PHD_FILE: MSMg01no414_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:59 2005
(642 letters)
>mm_chr10_65473839_65474879
Length = 1041
Score = 1114 bits (576), Expect = 0.0
Identities = 622/638 (97%), Gaps = 3/638 (0%)
Strand = Plus / Plus
Query: 5 gaattctgatactcatgtgaccctttgcaattgacagaagtagccttcatctaagccaat 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgatactcacatgaccctttgcaattgacagaagtagccttcatctaagccaat 264
Query: 65 ctttgtcctacttctctcaatacaggatagtccaaacattcttctttgtatattgatgga 124
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 ctttgtcctacttctcacaatacaggatagtccaaacattcttctttgtatattgacgga 324
Query: 125 atctttctataagaaagaaacacttttttacttaagatattttttcccaaataggttaaa 184
||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||
Sbjct: 325 atctttctataagaaagaagcacttttttacttaagacattttt-cccaaataggttaaa 383
Query: 185 atctgggatataaaaacctgtaggttttcaaactacattctgttttcagtacatatcctc 244
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||
Sbjct: 384 atctgggatataaaaacctgtaggttttcaaaccacattctgttttaagtacatatcatc 443
Query: 245 aacctgagaaaatagagcagaaacttacttatctggataagaagaaatgaagcagaacct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacctgagaaaatagagcagaaacttacttatctggataagaagaaatgaagcagaacct 503
Query: 305 acagagagaaatgagcctatgaaatcaaatcaaagacatacttaagatattatataccta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 acagagagaaatgagcctatgaaatcaaatcaaagacatacttaagatattatatgccta 563
Query: 365 ttttaaattctaaatatatgatcagtgtcaatagccattacagaaatgcaaattaaagcc 424
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 564 ttttaaattccaaatatatgatcagtgtcaatagccattacaaaaatgcaaattaaagcc 623
Query: 425 acaataaattactgcagttaggattacatctattgagaagtagaatatgaattggtgagg 484
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ataataaattactgcagttaggattacatctattgagaagtagaatatgaattggtgagg 683
Query: 485 aaaccttcatgacagttactaaaagcacacacctctgcagacatttagagtggccctatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaaccttcatgacagttactaaaagcacacacctctgcagacatttagagtggccctatt 743
Query: 545 cataatcaccaaagactcaaaacagcccagctgtccactaatttgatggggataaataaa 604
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cataatcacca--gactcaaaacagcccagctgtccactaatttgatggggataaataaa 801
Query: 605 gagtggaaagtatacactgagacaccaaacagaaatga 642
||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gagtggaaagtatacactgagacaccaaacagaaatga 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_b12.g1 MSMg01no414_b12.g1 CHROMAT_FILE:
MSMg01no414_b12.g1 PHD_FILE: MSMg01no414_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:59 2005
(522 letters)
>mm_chr10_65649365_65650286
Length = 922
Score = 909 bits (470), Expect = 0.0
Identities = 509/522 (97%)
Strand = Plus / Minus
Query: 1 ttcacgatgccaatcacatctggttctactttcccttgccttgggtgagtgcatgggaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 722 ttcacgatgccaatcacatctggttctactttcccttgccttgggtgagtgcatggaaaa 663
Query: 61 gtggactgactgagaagtattgcaggaagggaagattaattactcatgctttggcctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gtggactgactgagaagtattgcaggaagggaagattaattactcatgctttggcctgag 603
Query: 121 ggtagaggaaggcagtcctggcactcagagtaacaggggagcctcttagtggggtggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ggtagaggaaggcagtcctggcactcagagtaacaggggagcctcttagtggggtggagc 543
Query: 181 aaatggctaaaacatttgactgctgaaaagcagctttctttcttgtcgtctctgagaaca 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 542 aaatggctaaaacatttgactgctgaaaagcagctttctttcttgtcatctctgagaaca 483
Query: 241 cattaacattctttttttttcacacggctttaattggctatctcagtagtgcgtttttga 300
|||||| |||| | ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 482 cattaatattcataacttttcacacagctttaattggctatctcagtagtgcatttttga 423
Query: 301 atttatcactacccatcgatttccttgcagaataggctgcctgctgcttttagtggaggt 360
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 atttatcactatccatcaatttccttgcagagtaggctgcctgctgcttttagtggaggt 363
Query: 361 tatagctaaaaagaaccaggagtgtcaggtctggtatcagcacaatgaggaatcagattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatagctaaaaagaaccaggagtgtcaggtctggtatcagcacaatgaggaatcagattt 303
Query: 421 cttactctatagtatctgtagaccttggcacagtaacagagttcaattttcacctacctc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cttactctatagtatctgtagaccttggcacagtaacagagttcaattttcacctacctt 243
Query: 481 ggtatggcacagagaaaaggagaagcccatcagagtccagga 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtatggcacagagaaaaggagaagcccatcagagtccagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
