Query= MSMg01no414_c22.b1 MSMg01no414_c22.b1 CHROMAT_FILE:
MSMg01no414_c22.b1 PHD_FILE: MSMg01no414_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:07 2005
(541 letters)
>mm_chr10_96886507_96887446
Length = 940
Score = 1009 bits (522), Expect = 0.0
Identities = 534/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaacagtcctctcttagaaatttataggcgtttcaaacagacagcacaaatata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacagtcctctcttagaaatttataggcgtttcaaacagacagcacaaatata 263
Query: 64 gtgtagaaaacctgatcaacataaaccattaaggtggcaaaattgctattaataggacac 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgtagaaaacctgatcatcataaaccattaaggtggcaaaattgctattaataggacac 323
Query: 124 tctagctgacagaaattaaatttatatttttccagcatctataaaatattttccaacatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctagctgacagaaattaaatttatatttttccagcatctataaaatattttccaacatg 383
Query: 184 gaccaaactttgtaagggtaaaaaagaaaagaaaaatctcaaaactttgtaagtgtttac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaccaaactttgtaagggtaaaaaagaaaagaaaaatctcaaaactttgtaagtgtttac 443
Query: 244 atcataagagcataaggagtatgctctattatgccaatgaaatcaactaaatttagtaaa 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcataagagcataag-agtatgctctattatgccaatgaaatcaactaaatttagtaaa 502
Query: 304 agagagaaaagaataacaagtctgtccactggaagattgaataacaaacttcccaggtac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agagagaaaagaataacaagtctgtccactggaagattgaataacaaacttcccaggtac 562
Query: 364 taatggctcaaggaagaatttcagaaaaggtggagtacgcaaatttacatggggataaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 563 taatggctcaaggaagaatttcagaaaaggtggagtacgcaaatttacacagggataaaa 622
Query: 424 tttgaataagtcaaaatatctggaggactggagtgcacacaacacagttttgaagataaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttgaataagtcaaaatatctggaggactggagtgcacacaacacagttttgaagataaa 682
Query: 484 actcacaagacatatgcttatactaagaaataaacaaaggtcttaaattggtaagtca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 actcacaagacatatgcttatactaagaaataaacaaaggtcttaaattggtaagtca 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space: 493830
Effective search space used: 493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_c22.g1 MSMg01no414_c22.g1 CHROMAT_FILE:
MSMg01no414_c22.g1 PHD_FILE: MSMg01no414_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:07 2005
(253 letters)
>mm_chr10_97058671_97059323
Length = 653
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%)
Strand = Plus / Minus
Query: 1 tgtagcccatttggaatgatgctttcactctaagagttctcttttgattggtagcaatca 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 390 tgtagcccatttggaatgatgctttcactctaagagttctctcttgattggtagcaatca 331
Query: 61 tttgttatgtactgagaaccatgaaagaccgaccaagagagcaagcatgaaagagaacat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tttgttatatactgagaaccatgaaagaccgaccaagagagcaagcatgaaagagaacat 271
Query: 121 ttcttcttaatccctgccttgagggaactgaaacccttcaaccacatggaggttgcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttcttcttaatccctgccttgagggaactgaaacccttcaaccacatggaggttgcttta 211
Query: 181 gcagtccagcagagagagagagagagagagggagagagagagagagagagagagagagag 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 210 gcagtccagcagagagagagagagagagagagagagagagagagagagagagagagagag 151
Query: 241 agagagagaga 251
|||||||||||
Sbjct: 150 agagagagaga 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
