| Query= MSMg01no414_h20.g1 MSMg01no414_h20.g1 CHROMAT_FILE:
MSMg01no414_h20.g1 PHD_FILE: MSMg01no414_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:33 2005
(517 letters)
>mm_chr10_106007514_106008430
Length = 917
Score = 789 bits (408), Expect = 0.0
Identities = 478/512 (93%), Gaps = 21/512 (4%)
Strand = Plus / Minus
Query: 5 gaaaaattcaatgagtccaagagtattctctttaagaaaaattttgtttgaacatttcat 64
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 897 gaaaaattcaatgagtccaagagtattctctttaagaaaatttttgtttgaagatttcat 838
Query: 65 ttcctttatgtaaagtattgtttgattctatttatttttcatgcaatgttgacttaagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttcctttatgtaaagtattgtttgattctatttatttttcatgcaatgttgacttaagag 778
Query: 125 ttagctttccaggaatttgtcaatcttgtctatcatttaaatccatcaatatagtaggtg 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ttagctttccaggaatctgtcaatcttgtctatcatttaaatccatcaatatagtaggtg 718
Query: 185 gttaaaacactctccctctcactcttgttctcattgctgtctgcaagaattatatatata 244
||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 717 gttaaaacactctccctctcactcttgttctcattgctgtctgcaagaatt-t------- 666
Query: 245 tatatatatatatatatataaagttaaattctgctctagttacatgttgtagggtttggg 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 665 --------tatatatatataaagttaaattctgctctagttacatattgtagggtttggg 614
Query: 305 gaatagactcaaagctttgcacatggttcaagaattttctgcccagaccctcagatatct 364
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 613 gaatagactcaaagctttgcacacggttcaacaattttctgcccagaccctcagatatct 554
Query: 365 tactgctgagttattcgatggatctataagagagttacaaacgtgaatgcattttaaata 424
||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 553 tactgctgagttattagatgaatctataagagagttacaaatgtgaatgcattttaaata 494
Query: 425 atcctgttgttttatgttctacaataaaaatatttatacttatttttgctattacttgaa 484
|||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||| |
Sbjct: 493 atcctgttattttatgttctacaa-aaaaag--ttatacttatttttgctactacttgta 437
Query: 485 tttttatttttcctctttattt--ttttaact 514
|||||||||||||||||||||| ||||||||
Sbjct: 436 tttttatttttcctctttatttctttttaact 405
Score = 58.7 bits (30), Expect = 1e-12
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 235 tatatatatatatatatatatatatatata 264
||||||||||||||||||||||||||||||
Sbjct: 303 tatatatatatatatatatatatatatata 332
Score = 58.7 bits (30), Expect = 1e-12
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 235 tatatatatatatatatatatatatatata 264
||||||||||||||||||||||||||||||
Sbjct: 332 tatatatatatatatatatatatatatata 303
Score = 56.8 bits (29), Expect = 4e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 236 atatatatatatatatatatatatatata 264
|||||||||||||||||||||||||||||
Sbjct: 302 atatatatatatatatatatatatatata 330
Score = 56.8 bits (29), Expect = 4e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 235 tatatatatatatatatatatatatatat 263
|||||||||||||||||||||||||||||
Sbjct: 330 tatatatatatatatatatatatatatat 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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