AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATCTGTTCACCATGCAATAAAGCTATATAGCAACCTTAAAAATGA
CAGAAGGAAGGAAAACTCATGGAAGCTAAATGTTATATTGAACCATAACT
GGGTCAAGGAAGGAATCACAAAAGAAAATTAAAAAACTCTTAGAATTGAA
TGAAAATTACAACACAACATACAGCTATCTATGGGGCACAAAAGGCAGTC
CTAAGATGAGAGTTTACAAGACCAAGTGCATACATATTTTTTTTCAGAGA
TGAGGGAATTTTTGAAAATATAAACTGTAGATCCAAATATTTTGTTAGAC
ACAAGTACAAAAATATTTTCCAATAGGCTGTACCTATATAATCATCCCAG
ACTATCATATCTAATTTCTTCCAAAGCACTCGGAAAATTGTTTTCTCTTT
AAGATAAAAATTATTATTTGAAAAGAGAACTTCCTAGGCAAATCAGCAAA
AATACTGTTCCTGTGTCATTATACAGACAACTTCCATGTATCTTAACAAA
ACTTCACAATGAGACTGAGGTCACATGTCAAGATGGGTAAGCGTCGTATT
TGTTTTGCTGGAAATGATTTTCCAATTTTGCTTACCCCCCATGTGTTCTT
CACCAACTCCAATTGGAAAAAAAACACCGGCTAATATTCCTTTTTAAATG
GGGCTAGGGCCAATAAGCCCTCTGTTACGTTTGTTTTAATTG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCACAGGGCAATAAACTGAAAGGGAAGC
AGGAATCTTTATACCAAACTGTATTAAAAGACATGGCAATCCCTGGTAGT
ACAGATAAGGGAGAGCCATTGGGCAGACCAGCTCAGCTGCAACCCCAGGT
TCAGATTCAGGGTTTTGAGTTGACCAATCCTGAAATCTATATCATCTGTG
AACTGTTCAGGCATGTGAAAGTTTGGCTAGGACACAGGGCAACAGCAGGA
TAACTGGGAGGAGTCTTGTTGAGGGTCCAATATTGATGGTGTCACAGAAG
CCAGAGACCTTAATGACTCATTGCAATGAACATTTGCAAGTGAAGATTTG
TGGGCAGAGGGGGATACTGTACACTGTGACACACTACAGTTTCCATTATA
AGATGTTTTCTAGGCTTTGTTTTGGTCTATATGTTTGTGTGCCCTTTATT
TGGGGCTGGGGAAGGCCGTTCCCTTTTCCCTTCCCTCTTCTTCTCCTCCC
TTTTCTTTCTTTCCTCTCCCCTTTTCCCCCTTTTCCCTCTCTTCTTCTTC
CTCCCCCCTCTCCTCTCTCCCTTCCTTCCTTCCTCTTTCTTTTTTTCTCA
TTCCTTCCCTCTTCCCTTCCCTTTTCTTCTTTCCTTCTTTTCCCTTTTCT
TCCTTTTCTCTCTCCCTT

Query= MSMg01no415_b10.b1 MSMg01no415_b10.b1 CHROMAT_FILE:
MSMg01no415_b10.b1 PHD_FILE: MSMg01no415_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:21 2005
         (540 letters)



>mm_chr10_51375442_51376381
          Length = 940

 Score =  940 bits (486), Expect = 0.0
 Identities = 524/538 (97%), Gaps = 4/538 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatct--gttcaccatgcaataaagctatatagcaaccttaaaaatgacagaag 62
           |||||||||||  ||  ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattctatctgagt--accatgcaataaagctatatagcaaccataaaaatgacagaag 262

                                                                       
Query: 63  gaaggaaaactcatggaagctaaatgttatattgaaccataactgggtcaaggaaggaat 122
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaaggaaaactcatgggagctaaatgttatattgaaccataactgggtcaaggaaggaat 322

                                                                       
Query: 123 cacaaaagaaaattaaaaaactcttagaattgaatgaaaattacaacacaacatacagct 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cacaaaagaaaattaaaaaactcttagaattgaatgaaaattacaacacaacatacagct 382

                                                                       
Query: 183 atctatggggcacaaaaggcagtcctaagatgagagtttacaagaccaagtgcatacata 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atctatggggcacaaaaggcagtcctaagatgagagtttacaagaccaagtgcatacata 442

                                                                       
Query: 243 ttttttttcagagatgagggaatttttgaaaatataaactgtagatccaaatattttgtt 302
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttttttttcagagttgagggaatttttgaaaatataaactgtagatccaaatattttgtt 502

                                                                       
Query: 303 agacacaagtacaaaaatattttccaataggctgtacctatataatcatcccagactatc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agacacaagtacaaaaatattttccaataggctgtacctatataatcatcccagactatc 562

                                                                       
Query: 363 atatctaatttcttccaaagcactcggaaaattgttttctctttaagataaaaattatta 422
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 563 atatctaatttcttccaaagcactcggaaaattgttttctctttaagacaaaaattattg 622

                                                                       
Query: 423 tttgaaaagagaacttcctaggcaaatcagcaaaaatactgttcctgtgtcattatacag 482
           |||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 623 tttgaagagagaacttcctaggcaagtcagcaaaaatattgttcttgtgtcattatacag 682

                                                                     
Query: 483 acaacttccatgtatcttaacaaaacttcacaatgagactgaggtcacatgtcaagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 683 acaacttccatgtatcttaacaaaacttcacaatgagactgaggtcacatgacaagat 740


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space:   492900
Effective search space used:   492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)