CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTAAATTTTAATTTCATGTTTTCTAATTGTTTATGTTAGATTAGA
ATAACTAGGAGTTGTATAAAAAATTATTATCCACAACTTCTAAGAAATGG
TAGAAACATTTTTAAATATATTGATATGATCTCTGGTTCATCCAATTCCC
TGATTATTCATAAGAGTTGGATAGTTCTCCTGAAAGTAAGTACTTGTCAG
TTCTCTTAATAGCATCCAAGGAGAGAAATGTCAAAAATTCATGTGAAGCC
TATTTTGGTGTTTAATCCTGCTGAGGCTGTGTCTCTACAATTTGACATTC
AGTGGAAGCAATAAATGGTGATCATATATCATTAAAGAATTGGATCGACT
GCTCAAGTATTCCAGTGATCCCTTCTTTACAGTTTCACTGGTAAAAAGAA
TTATTCAGGATAGCTGCATGTATGTATGTATGTATGTATGTATGTATGTA
TGAATGNANANANGNNNNNNNNNNNNNNNNNNNNNNTNTTNNNTTTTNNN
NTTTTTTTTTNNNNNTTTTTTTTTTTTTTNTNTTNNNTTTTTTTNNTTNN
TTTTTTTTTTTTTTTTTTTTNTTTTTTTTNNTTTTTTTTTTTTTTNTTTT
TTTNNNTTTTNTTTNNNTTTTTTTTTNTTTTTNTTTTTTTTNNTTNTTTT
TTTTTTTTTTTTTTNNTTTTTNNNTTTTNTTTNTTTTNT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGCTCTAAAACCATCTGCCCCTGGGC
TTTGTTGTTGTTGTTGTTGGGAGACTTGACTGCTTCTGTTTCCTTCAGGG
TTATGGCATTGATCTAACTGGATATATGCATGTAGAAGAAAGCAAACATA
TTCATATTTACCACCCTTCACAAAACTCAATTCCAAGTGGATCAGGACCT
CAATATAAAACTGGATATACTAAGTCTCATAGAAGACAAAGTGGAAAAAA
ACTTTGAAGGCATTGGTACAGGAGACAATTTCTTGACAAGAACACCAATG
GCTCAGGCTATGTATCAGCTGATAAATGGAACCTCATGAAATTGAAAAGC
TTCTGTAAGGCAAAGGACACTTCCAATAGCACAAAATGGCAGCCTAAAGA
TTAGGAAAGGATCTTCACTAACCTTACATCTGACAAAAGGCTAATATCCA
AAATTTATAGAGAACTTACAAAGTTAGACCCCAACAAACCAAATAATCCA
ATTTAAAAAATGGGTATAAAGCCAAACTGAGAATTCTCAACAGAGGAATC
TCAAATGGAGCTAATACCTCAATAAAAAAGGGAAAAAAAAAAAAAAAAAG
AAAGGTTCCCATCCCTCACTTGTCCCGGGAAAGGAAACACAAATGCCCTT
TGAAACCCCCCTTTTATTCCTCCAAAGGGG

Query= MSMg01no415_g22.b1 MSMg01no415_g22.b1 CHROMAT_FILE:
MSMg01no415_g22.b1 PHD_FILE: MSMg01no415_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:49 2005
         (445 letters)



>mm_chr10_108821556_108822402
          Length = 847

 Score =  818 bits (423), Expect = 0.0
 Identities = 438/443 (98%), Gaps = 2/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtaaattttaatttcatgttttctaattgtttatgttagattagaataactag 64
           ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 622 gaattcagtaaattttaatttcacgttttctaattgtttatgtcagattagaataactag 563

                                                                       
Query: 65  gagttgtata-aaaaa-ttattatccacaacttctaagaaatggtagaaacatttttaaa 122
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gagttgtatagaaaaagttattatccacaacttctaagaaatggtagaaacatttttaaa 503

                                                                       
Query: 123 tatattgatatgatctctggttcatccaattccctgattattcataagagttggatagtt 182
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tatattgatgtgatctctggttcatccaattccctgattattcataagagttggatagtt 443

                                                                       
Query: 183 ctcctgaaagtaagtacttgtcagttctcttaatagcatccaaggagagaaatgtcaaaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctcctgaaagtaagtacttgtcagttctcttaatagcatccaaggagagaaatgtcaaaa 383

                                                                       
Query: 243 attcatgtgaagcctattttggtgtttaatcctgctgaggctgtgtctctacaatttgac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attcatgtgaagcctattttggtgtttaatcctgctgaggctgtgtctctacaatttgac 323

                                                                       
Query: 303 attcagtggaagcaataaatggtgatcatatatcattaaagaattggatcgactgctcaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 attcagtggaagcaataaatggtgatcatatatcattaaagaattggatcgactgctcaa 263

                                                                       
Query: 363 gtattccagtgatcccttctttacagtttcactggtaaaaagaattattcaggatagctg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtattccagtgatcccttctttacagtttcactggtaaaaagaattattcaggatagctg 203

                                  
Query: 423 catgtatgtatgtatgtatgtat 445
           |||||||||||||||||||||||
Sbjct: 202 catgtatgtatgtatgtatgtat 180


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 847
Length adjustment: 10
Effective length of query: 435
Effective length of database: 837
Effective search space:   364095
Effective search space used:   364095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)