Query= MSMg01no415_j02.b1 MSMg01no415_j02.b1 CHROMAT_FILE:
MSMg01no415_j02.b1 PHD_FILE: MSMg01no415_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:59 2005
(182 letters)
>mm_chr10_85425679_85426260
Length = 582
Score = 340 bits (176), Expect = 2e-98
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 4 ggaattcagctggatagaaagccatgaccagagcttccctggaggaacacgatgctttct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagctggatagaaagccatgaccagagcttccctggaggaacacgatgctttct 263
Query: 64 ggaaagcagtgccaccaggttccttcctcccagtagggacgacacttctggttccttcta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggaaagcagtgccaccaggttccttcctcccagtagggacgacacttctggttccttcta 323
Query: 124 cactggtgatagcgaacagagagccaggatagtagcgcatggagtagtttaggtac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cactggtgatagcgaacagagagccaggatagtagcgcatggagtagtttaggtac 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_j02.g1 MSMg01no415_j02.g1 CHROMAT_FILE:
MSMg01no415_j02.g1 PHD_FILE: MSMg01no415_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:59 2005
(472 letters)
>mm_chr10_85552256_85553127
Length = 872
Score = 634 bits (328), Expect = 0.0
Identities = 345/352 (98%), Gaps = 4/352 (1%)
Strand = Plus / Minus
Query: 123 cacacattttctacctaaatcctggaatcagccatccctcaagaagcctggctctccttg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 cacacattttctacctaaatcctggaatcagccatccctcaagaagcctggctctccttg 813
Query: 183 ggataaaagcatttttaaggaccataatcaaagtgctaagcatgttctttgctattttga 242
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ggataaaagcatttttgaggaccataatcaaagtgctaagcatgttctttgctattttga 753
Query: 243 tggccacttcttctaggtcttt--ggggggggggcataggaaaaaaacagatcataaatc 300
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 752 tggccacttcttctaggtctttggggggggggggcataggaaaaaaac--atcataaatc 695
Query: 301 tacactgacattttgaattcagattttagataagagagatttaacttactttgatttttt 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tacactgacattttgaattcaaattttagataagagagatttaacttactttgatttttt 635
Query: 361 tcaaattgtatttattttgcatttagggctaggatatgactgggtggtgtaacacttggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tcaaattgtatttattttgcatttagggctaggatatgactgggtggtgtaacacttggc 575
Query: 421 aaacatgggagcaggaattaacagaggaaggatggggagaggaaaggaggga 472
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 574 aaacatgggagcaggaattgacagaggaaggatggggagaggaaaggaggga 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
