Query= MSMg01no416_c05.b1 MSMg01no416_c05.b1 CHROMAT_FILE:
MSMg01no416_c05.b1 PHD_FILE: MSMg01no416_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:42 2005
(184 letters)
>mm_chr10_68571607_68572189
Length = 583
Score = 317 bits (164), Expect = 2e-91
Identities = 179/184 (97%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 1 tcatttcttattttcctccctaaaagaaccactcataccaagaaactctcatctttcttc 60
|||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 201 tcatttcttattttcctccctaaaagaaccactcataccaggtaactc-catctttcttc 259
Query: 61 ctacctggtaggtttgtaacgaacatatctacctccatcgggactatggagtttcagttg 120
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 260 ctacctggtcggtttgtaacgaacgtatctacctccatcgggactatggagtttcagttg 319
Query: 121 caataccaatcatggtgttgtctttgtatcttcctggttccgtttatgcacaggataggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caataccaatcatggtgttgtctttgtatcttcctggttccgtttatgcacaggataggg 379
Query: 181 gtgt 184
||||
Sbjct: 380 gtgt 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 583
Length adjustment: 8
Effective length of query: 176
Effective length of database: 575
Effective search space: 101200
Effective search space used: 101200
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no416_c05.g1 MSMg01no416_c05.g1 CHROMAT_FILE:
MSMg01no416_c05.g1 PHD_FILE: MSMg01no416_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:42 2005
(220 letters)
>mm_chr10_68774828_68775448
Length = 621
Score = 400 bits (207), Expect = e-116
Identities = 216/219 (98%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 1 taggctagcctgggctacatagtgacacacacacatacacacccagtctctcaaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 taggctagcctgggctacatagtgacacacacacatacacacccagtctctcaaacaaaa 360
Query: 61 caaaacaagagggtg-ctccagttgctcccacttgtaagccccagccctgcccgagctac 119
||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 359 caaaacaagcgggtgcctccagttgctcccacttgtaagccccggccctgcccgagctac 300
Query: 120 agtgtgagagtatttcaaacaaacttccggtctaaaaccaaagcaaaagacaagacaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agtgtgagagtatttcaaacaaacttccggtctaaaaccaaagcaaaagacaagacaaaa 240
Query: 180 gtaaggcaaaatgttgacatgtgacggaaaatgtcacgg 218
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtaaggcaaaatgttgacatgtgacggaaaatgtcacgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
