Query= MSMg01no416_i01.b1 MSMg01no416_i01.b1 CHROMAT_FILE:
MSMg01no416_i01.b1 PHD_FILE: MSMg01no416_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:08 2005
(653 letters)
>mm_chr10_106977529_106978579
Length = 1051
Score = 1222 bits (632), Expect = 0.0
Identities = 642/646 (99%), Gaps = 2/646 (0%)
Strand = Plus / Plus
Query: 8 ttcccctaggttgctctttccgcttctgtttgatgtcttctcatgggaacaaaatgagct 67
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcccctaggttgctctttccgctcctgtttgatgtcttctcatgggaacaaaatgagct 267
Query: 68 gatagcttggtctccccacgcttttcatttattctctctccctggaatccttccccttta 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gatagcttggtctccccacgcttttcatttattctctctccctggaatccttccccttta 327
Query: 128 tcttctcattagaattcggctcaggctgctgttcatcttagacatcacaattttcattag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tcttctcattagaattcggctcaggctgctgttcatcttagacatcacaattttcattag 387
Query: 188 tctttcctaacgagcatttagcgttgatccccacatctttatgcacgtctcaatcatgat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tctttcctaacgagcatttagcgttgatccccacatctttatgcacgtctcaatcatgat 447
Query: 248 acagttgtcctgtctaaaacacgtctccctgctacagttcttactctcatctgaatttat 307
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 448 acagttgtcctgtctaaaacacgtctccctcctacagttcttactctcatctgaatttat 507
Query: 308 acctggtagagattaccaacacagtaactgatgtttgtaccaagcgctcttcacccatag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acctggtagagattaccaacacagtaactgatgtttgtaccaagcgctcttcacccatag 567
Query: 368 tcattttactattctcaattcacccatagtcattttaatattctcaattcagtgaggcgg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tcattttactattctcaattcacccatagtcattttaatattctcaattcagtgaggcgg 627
Query: 428 atactatcttttcacaaatgaagacactgaggtgcagagagattaggtaatctgcctaaa 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 atactatcttttcacaaatgaagacactgaggtgcagagagattaggtaatctgcctaaa 687
Query: 488 gtcacttagcatgtaaatgctaaactggtaaataccaacgtatgaagcattgtttgcaat 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtcacttagcatgtaaatgctaaactggtaaataccaacgtatgaagcattgtttgcaat 747
Query: 548 agtataaaccttaataaataactaaaagaaaatagaacatgtgctaaaagattagtcaac 607
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agtataaacc--aataaataactaaaagaaaatagaacatgtgctaaaagattagtcaac 805
Query: 608 tttaggcatccaatatatatgtttattatgatatgataattttgat 653
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tttaggcatccaatatatatgtttattatgatatgataattttgat 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1051
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1041
Effective search space: 669363
Effective search space used: 669363
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_i01.g1 MSMg01no416_i01.g1 CHROMAT_FILE:
MSMg01no416_i01.g1 PHD_FILE: MSMg01no416_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:08 2005
(558 letters)
>mm_chr10_107153049_107154006
Length = 958
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%)
Strand = Plus / Minus
Query: 132 acatttgatatcttcagtataactaacacctatggggaaagcctgttaagtggtctatgt 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 acatttgatatcttcagtataactaacacctatggggaaagcctgttaagtggtctatgt 899
Query: 192 atattatttcagttagttttggaaaacaccctgtgacacaggtaaattattattctcagt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 atattatttcagttagttttggaaaacaccctgtgacacaggtaaattattattctcagt 839
Query: 252 caaatatgggaaaaacatgtgccttagaagaattaagcaagttgcctaaagttttccatc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 caaatatgggaaaaacatgtgccttagaagaattaagcaagttgcctaaagttttccatc 779
Query: 312 tgtggaagaactacaagattgtagggttccactcatgcattttgtaaaagcttaggaggt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tgtggaagaactacaagattgtagggttccactcatgcattttgtaaaagcttaggaggt 719
Query: 372 tcaaagccactcacagtgtcttccctgccagttgagctgtatccctaaatcatgcaaata 431
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 718 tcaaagccactcacagtgtcttccctgcctgttgagctgtatccataaatcatgcaaata 659
Query: 432 aaaagttgtttgtgtgccccttaaattttgactttcctcctctatgttgttaatcaaaca 491
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 658 aaaagttgtttgtgtgccccttaaattttgactttcctcctctatgttgttagtcaaaca 599
Query: 492 tattcatttttcacttacactttttatgagtactcatttgcccagttatatagagtgtga 551
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 598 tattcatttttcacttacacttattctgagtactcatttgcccagttatatagagtgtga 539
Query: 552 ccataag 558
|||||||
Sbjct: 538 ccataag 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
