XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTACT
GAATTCCAAGTTTGTCAGCTTCAAGGATTTTCTGGGACATTGGAACACTG
GCGAAGGCTTAACTATGTCAGAATTCAATCTTTAAAGGCACTTATAATAA
ACTAATTCTAAAAGAGAACATGAGGATCCATACACCAGACTAACGCGGGG
ATAGGGTATGAGTATACAGGTTATGAGAATGCCAAAGATCCAGGAGGTGG
GTTTCTCTGAAAATCTTTGCCTCGTGAGTGCTCCCCGGCCTCTCAGCCTG
CCTAGCAAACTTCACTGAAGCGTGCATAGCAGTTAATGATAAATGAAAAA
CTCTGGCCTTCACACACAAGGGCACATGCGTATGTGCAAACACACATGTG
AAAACACATGCACCATACACAATACATGTACACACACAATATCACGACAC
AAGGCTAAATGGGCCAGCCGTCTAGTTTTTGAATATGAACAAATCTAGTT
AAGCAACTTGCCTTAACAGTAGTGAAATCACTTCTGCATTTCAATTGACC
CATGTATATTCTGTAGAAATAATTTTTGAAGTTCTAATGTATATCTAAGA
GATTGACTTCAATTTAAAAAAAACCTTTCAGGGCTAGGGAGACAGTTCCA
CTGTTAATAACATGCCCTTGTTCTTTCAGAGAACCTCGCATAGGTTAGTT
CCAAGAACCCACCTTCTGGAACAACTT

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTTCTAAGTGGAAAACTGTTACTCG
GAGGGAGAAAAAAAACAAATAGAAACCTGGGATGCTAATAATGACTGGAA
ATGATTGGCTAGATCACCCTCCTCAAGGATCTCTCTGCACAACCATAAAG
TGAATGCAGAGGTCCTAGCTCAGATCCATATGGGGTCCATGACTGTCACT
TCGGTCTCTGTGATTCCCTATGACCTGGGCTTAGTTGATGCTGTGGGTTC
TGTACTTGTGTTGGGCCGGACCTTTCAAATGCCTTCCAATTCCAATTATC
CATCCCAATACTCCAATCTTCCCCCACGCCAACTGCCTGATCCTCACCTG
ACCCCAGTCCACTTGCAAAATCTTTCCAGGGATCTGTGCGTTCCCTCATC
CAATCCTCCTTGTTAGTTAGCCTCTCCAGGTCTGTAGAGTGTAGCATGGT
TATCCTTTACTGAGCAGCTATTGACCCCTTGTAATCATGTGTGTATTTCC
TGGAATAGAGTATATCCCTCAGAATGGTCTTTTTGTCTATTTCCATCGAT
CTGACTGCAAGTGTCATATTGAAAAAAAAGACGTGGAAGTCCATCGTTTA
CGTGTTTCGCCGCTTTAAAAAAATCCATTTCTGTTGTTAAAGGAATGCTA
GATTAGTTCCCGACGTGGCGATTATGAACAAAG

Query= MSMg01no416_k02.b1 MSMg01no416_k02.b1 CHROMAT_FILE:
MSMg01no416_k02.b1 PHD_FILE: MSMg01no416_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:18 2005
         (529 letters)



>mm_chr10_106359988_106360918
          Length = 931

 Score =  984 bits (509), Expect = 0.0
 Identities = 522/527 (99%), Gaps = 2/527 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctactgaattccaagtttgtcagcttcaaggattttctgggacattggaacact 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctactgaattccaagtttgtcagcttcaaggattttctgggacattggaacact 264

                                                                       
Query: 65  ggcgaaggcttaactatgtcagaattcaatctttaaaggcacttataataaactaattct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 ggcgaaggcttaactatgtcagaattcaatctttaaaggcacttataatgaactaattct 324

                                                                       
Query: 125 aaaagagaacatgaggatccatacaccagactaacgcggggatagggtatgagtatacag 184
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 aaaagagaacatgaggatccatacaccagactaaagcggggatagggtatgagtatacag 384

                                                                       
Query: 185 gttatgagaatgccaaagatccaggaggtgggtttctctgaaaatctttgcctcgtgagt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttatgagaatgccaaagatccaggaggtgggtttctctgaaaatctttgcctcgtgagt 444

                                                                       
Query: 245 gctccccggcctctcagcctgcctagcaaacttcactgaagcgtgcatagcagttaatga 304
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctctccggcctctcagcctgcctagcaaacttcactgaagcgtgcatagcagttaatga 504

                                                                       
Query: 305 taaatgaaaaactctggccttcacacacaagggcacatgcgtatgtgcaaacacacatgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaatgaaaaactctggccttcacacacaagggcacatgcgtatgtgcaaacacacatgt 564

                                                                       
Query: 365 gaaaacacatgcaccatacacaatacatgtacacacacaatatcacgacacaaggctaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaaaacacatgcaccatacacaatacatgtacacacacaatatcacgacacaaggctaaa 624

                                                                       
Query: 425 tg--ggccagccgtctagtttttgaatatgaacaaatctagttaagcaacttgccttaac 482
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgatggccagccgtctagtttttgaatatgaacaaatctagttaagcaacttgccttaac 684

                                                          
Query: 483 agtagtgaaatcacttctgcatttcaattgacccatgtatattctgt 529
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtagtgaaatcacttctgcatttcaattgacccatgtatattctgt 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 931
Length adjustment: 10
Effective length of query: 519
Effective length of database: 921
Effective search space:   477999
Effective search space used:   477999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)