Query= MSMg01no419_f09.b1 MSMg01no419_f09.b1 CHROMAT_FILE:
MSMg01no419_f09.b1 PHD_FILE: MSMg01no419_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:50 2005
(364 letters)
>mm_chr10_36653324_36654087
Length = 764
Score = 600 bits (310), Expect = e-176
Identities = 316/318 (99%)
Strand = Plus / Plus
Query: 1 taaaaattcctatgaagttaaaatatgatacttgttactaaactgagaattaatttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 taaaaattcctatgaagttaaaatatgatacttgttactaaactgagaattaattaaaat 260
Query: 61 taagatgttctataattgctgttttataccttgtctaaagatggtgaagtcacatggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagatgttctataattgctgttttataccttgtctaaagatggtgaagtcacatggcag 320
Query: 121 gctggaacccatgtgaacaacatggttgctatttaaaaacaattgttccccaggcagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctggaacccatgtgaacaacatggttgctatttaaaaacaattgttccccaggcagtgg 380
Query: 181 tagtacatgcctttaatcccagcacttgggaggcagcggcaagcagatttctgagttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtacatgcctttaatcccagcacttgggaggcagcggcaagcagatttctgagttcaa 440
Query: 241 gaccagcctgttctacagagtgagttccaggacagccagggctatacaaagaaaccctgt 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaccagcctggtctacagagtgagttccaggacagccagggctatacaaagaaaccctgt 500
Query: 301 ctctaaataaataaataa 318
||||||||||||||||||
Sbjct: 501 ctctaaataaataaataa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_f09.g1 MSMg01no419_f09.g1 CHROMAT_FILE:
MSMg01no419_f09.g1 PHD_FILE: MSMg01no419_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:50 2005
(343 letters)
>mm_chr10_36813016_36813758
Length = 743
Score = 592 bits (306), Expect = e-173
Identities = 329/346 (95%), Gaps = 16/346 (4%)
Strand = Plus / Minus
Query: 1 tttcccagaaaagggttccagagaccatgacatttcagagtgatgactgtagcagcccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttcccagaaaagggttccagagaccatgacatttcagagtgatgactgtagcagcccta 279
Query: 61 gctggcttctcacactatctgttggaatcctgagacaccctgagttctcagtcagggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gctggcttctcacactatctgttggaatcctgagacaccctgagttctcagtcagggagt 219
Query: 121 ggggagattggatgagcaggcataagcctaaaagcccagcactcaggggtgctgaggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ggggagattggatgagcaggcataagcctaaaagcccagcactcaggggtgctgaggcag 159
Query: 181 gaggatgatgaatttaaggagagcctgagctacagagtacaaaactttaaaaaaaaaaag 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 158 gaggatgatgaatttaaggagagcctgagctacagagtagaaaactttaaaaaaaaaaag 99
Query: 241 acaaaggtttttttta--------gggaagaaagaaaaagaaaaatgaaaaaggggagaa 292
||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 98 acaaagg--------aaaagaaaagggaagaaagaaaaagaaaaatgaaaaaggggagaa 47
Query: 293 aggaaggaaagaaggaacaaaggaagaaatgaggactaaaggaagg 338
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 aggaaggaaagaaggaacaaaggaagaaatgaggactaaaggaagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
