Query= MSMg01no419_j04.b1 MSMg01no419_j04.b1 CHROMAT_FILE:
MSMg01no419_j04.b1 PHD_FILE: MSMg01no419_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:10 2005
(379 letters)
>mm_chr10_72322628_72323406
Length = 779
Score = 710 bits (367), Expect = 0.0
Identities = 373/375 (99%)
Strand = Plus / Plus
Query: 5 gaattctcttatatccttggcaacttgaagagctgatgggtttgatgttggtaagaaaca 64
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttaaatctttggcaacttgaagagctgatgggtttgatgttggtaagaaaca 264
Query: 65 ctgacacaatgatgcggttcacctcacagggcagcgacatcacatcatcactgttctact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgacacaatgatgcggttcacctcacagggcagcgacatcacatcatcactgttctact 324
Query: 125 gtgaatatttttgcaggcacacattatagctgcctgaactttgagagatagactttgcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgaatatttttgcaggcacacattatagctgcctgaactttgagagatagactttgcat 384
Query: 185 tataagagaaaaaaataatactattttgtgtatgccataagtgtgagtatccacattgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tataagagaaaaaaataatactattttgtgtatgccataagtgtgagtatccacattgga 444
Query: 245 aaatagttctgatgaattctggtgtgattcataaccttaccctgaggaagtggagctgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatagttctgatgaattctggtgtgattcataaccttaccctgaggaagtggagctgtg 504
Query: 305 gtcccttgatagccctggtacagatcttacttctctattgaaaggataacctttgttatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtcccttgatagccctggtacagatcttacttctctattgaaaggataacctttgttatt 564
Query: 365 gataataactggatg 379
|||||||||||||||
Sbjct: 565 gataataactggatg 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_j04.g1 MSMg01no419_j04.g1 CHROMAT_FILE:
MSMg01no419_j04.g1 PHD_FILE: MSMg01no419_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:10 2005
(373 letters)
>mm_chr10_72510222_72510994
Length = 773
Score = 611 bits (316), Expect = e-179
Identities = 359/380 (94%), Gaps = 14/380 (3%)
Strand = Plus / Minus
Query: 5 gaattccttgaacgagaaacagaaaataaaagttatgaggaaaggaaggcttttttagac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaattccttgaacgagaaacagaaaataaaagttatgaggaaaggaaggcttttttagac 410
Query: 65 atctctatggggtctggtaagacattccaaacagctgcctaaaacacagacactgctttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atctctatggggtctggtaagacattccaaacagctgcctaaaacacagacactgctttc 350
Query: 125 ccgcagaataagagctcctcatcctgctattggaacagacaactgggtgtgtctaggatt 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcagaatgagagctcctcatcctgctattggaacagacaactgggtgtgtctaggatt 290
Query: 185 gaaatactggaattgcatcccaccttgagcacagatatcattgaacattcttgctactga 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 289 gaaatactggaattgcatcccaccgtgagcacagatatcattgaacattcttgctactga 230
Query: 245 tctgagacttcataattgtcactgagtgtgtgtgtatgtgagtctgt--------gtgtg 296
||||||||||||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 229 tctgagacttcataaatgccactgagtgtgtgtgtatgtgagtctgtatatgtctgtgtg 170
Query: 297 ---cctgtgtgtatgtctgtttgcatgtctgtatgtctgtgtgtgtctgcatctgtgtgg 353
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tgtcc-gtgtgtatgtctgtttgcatgtctgtatgtctgtgtgtgtctgcatctgtgtgg 111
Query: 354 ccgcctgtgtgcatgtctgt 373
| ||||||| |||||||
Sbjct: 110 gtgtctgtgtg--tgtctgt 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
