Query= MSMg01no419_j07.b1 MSMg01no419_j07.b1 CHROMAT_FILE:
MSMg01no419_j07.b1 PHD_FILE: MSMg01no419_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:10 2005
(244 letters)
>mm_chr10_83582435_83583079
Length = 645
Score = 412 bits (213), Expect = e-119
Identities = 237/245 (96%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 tagcaagtgttaattatacacaggagcaggaggtatgtgtgcactttaagcccagtcatt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagcaagtgttaattatacataggagcaggaggtatgtgtgcactttaagcccagtcatt 260
Query: 61 ggtcttacaccctagctcctccccactggttctaattcctctcactcccac-tgtagctc 119
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 261 gctcttacaccctagctcctccccactggttctaattcctctcattcccacttgtagctc 320
Query: 120 tttcttccctttggacggctctgagttatgcagaactttgcggtgtcacctcatgagaag 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcttccctttggacagctctgagttatgcagaactttgcggtgtcacctcatgagaag 380
Query: 180 tcagttagggagatctttgctgagcaagcacatctgcccacgggccttgggctgacacag 239
|||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 381 tcagttagggagatctttgctgagcaagcacatccacccatgggccttgggctgacacag 440
Query: 240 actgc 244
|||||
Sbjct: 441 actgc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_j07.g1 MSMg01no419_j07.g1 CHROMAT_FILE:
MSMg01no419_j07.g1 PHD_FILE: MSMg01no419_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:10 2005
(247 letters)
>mm_chr10_83734442_83735088
Length = 647
Score = 431 bits (223), Expect = e-125
Identities = 241/247 (97%)
Strand = Plus / Minus
Query: 1 agtgtagtaggactcccagacacatcccatcacctagaattgtcttggactacttgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtgtagtaggactcccagacacatcccatcacctagaattgtcttggactacttgttta 261
Query: 61 tctcctacctgcatttaattttagagtttttgccttccatgggacttgcattctatgcat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctcctacatgcatttaattttagagtttttgccttccatgggacttgcattctatgcat 201
Query: 121 attcattaaagtagtgtttgttaagtgtcccatgtgtgcaggcactctccaccaagaaca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 attcattaaagtagtgtttgttaagtgtcccatgtgtgcaggcattctccaccaagaaca 141
Query: 181 cataaataaagctaatagatgataatcccagccccttggagcttgcattctgtgggatgg 240
|| |||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 140 cagaaatgaagctaacagatgataatcccagacccttggagcttgcattctgtgggatgg 81
Query: 241 ataagaa 247
|||||||
Sbjct: 80 ataagaa 74
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
