Query= MSMg01no419_l24.b1 MSMg01no419_l24.b1 CHROMAT_FILE:
MSMg01no419_l24.b1 PHD_FILE: MSMg01no419_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:23 2005
(248 letters)
>mm_chr10_44609677_44610324
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 ctattatgtccccaaatgattcaaccaagagggacatgagacccccccactgatagaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctattatgtccccaaatgattcaaccaagagggacatgagacccccccactgatagaagt 260
Query: 61 caatacatgggaagcagatagacagagtaacagcaaatcagagaggtggagctacaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatacatgggaagcagatagacagagtaacagcaaatcagagaggtggagctacaagag 320
Query: 121 agagcagaagacagacagaataggtgctgtttcatgtgtgaacattttctacccatggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagcagaagacagacagaataggtgctgtttcatgtgtgaacattttctacccatggac 380
Query: 181 acagaactcacaggtgtagagtctgtggatacagaaggcggtcccattgcttccccgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaactcacaggtgtagagtctgtggatacagaaggcggtcccattgcttccccgtct 440
Query: 241 atcccaac 248
||||||||
Sbjct: 441 atcccaac 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_l24.g1 MSMg01no419_l24.g1 CHROMAT_FILE:
MSMg01no419_l24.g1 PHD_FILE: MSMg01no419_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:23 2005
(480 letters)
>mm_chr10_44785530_44786412
Length = 883
Score = 880 bits (455), Expect = 0.0
Identities = 475/483 (98%), Gaps = 3/483 (0%)
Strand = Plus / Minus
Query: 1 tcactgttggtttctaactattaaggctcatgttgcaggctagcactactgaacccagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcactgttggtttctaactattaaggctcatgttgcaggctagcactactgaacccagtc 624
Query: 61 gccaggggctgccaggaggtctagctcctaccatctctgtatgcaatgcgtcataaagat 120
||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 623 gccaggggctgccaggaggtctagctcctgccatctctgtgtgcagtgcgtcataaagat 564
Query: 121 aatcccaaggacacttgactcagagaatccccagataagcgttgatgcctccttaaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatcccaaggacacttgactcagagaatccccagataagcgttgatgcctccttaaatgt 504
Query: 181 tgatttgaaaactgttattgtcccagttttacagttgagataaactggaactttgttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgatttgaaaactgttattgtcccagttttacagttgagataaactggaactttgttttg 444
Query: 241 ctcagtttctcaaatagtaggggtggagaagaaaagagagccaggattcagtccctgaag 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctcagtttcacaaatagtaggggtggagaagaaaagagagccaggattcagtccctgaag 384
Query: 301 gctaacatttcatttctacctgtccgacgtcttccccctcagaaggcacatagagatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gctaacatttcatttctacctgtccgacgtcttccccctcagaaggcacatagagatgca 324
Query: 361 gtttgtttgtagtttacaagggcatcctttttagcaagagaaacttgagtttgacgactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 323 gtttgtttgtagtttacaagggcatcctttttagcaagagaaacttgagtttgactactt 264
Query: 421 atgctagaaagactgacaagtgtagcagcagctcattattattat---cattattatcat 477
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 263 atgctagaaagactgacaagtgtagcagcagctcattattattattatcattattatcat 204
Query: 478 tgt 480
|||
Sbjct: 203 tgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 883
Length adjustment: 10
Effective length of query: 470
Effective length of database: 873
Effective search space: 410310
Effective search space used: 410310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
