Query= MSMg01no419_o22.b1 MSMg01no419_o22.b1 CHROMAT_FILE:
MSMg01no419_o22.b1 PHD_FILE: MSMg01no419_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:37 2005
(372 letters)
>mm_chr10_69080746_69081516
Length = 771
Score = 551 bits (285), Expect = e-161
Identities = 363/421 (86%), Gaps = 52/421 (12%)
Strand = Plus / Minus
Query: 1 gacttt-aaaaaaatctcatttgtatttaggcaccaacttggagaaaacccactctgtct 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gactttaaaaaaaatctcatttgtatttaggcaccaacttggagaaaacccactctgtct 400
Query: 60 gctaggccccttgcttccatatcatgttaaatatggattttaaagctaaacgcagtaaca 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gctaggccccttacttccatatcatgttaaatatggattttaaagctaaacgcagtaaca 340
Query: 120 tgcactaatcccccctcttttcttttttccgtgtgtgctgaggattgaactagagtctcc 179
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 339 tgcactaatcccccct--tttcttttttcagtgtgtgctgaggattgaactagagtctcc 282
Query: 180 catgtcctcacatgcgtatctgtgaatgcacctttttatattcctaaacatgacattttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 catgtcctcacatgcgtatctgtgaatgcacctttttatattcctaaacatgacattttc 222
Query: 240 tatatttgtgtcattgctgat--------------------------------------- 260
|||| |||||||||||||||
Sbjct: 221 tataactgtgtcattgctgatttaagtaaatcttgtgatagatctcataaaagatcaaag 162
Query: 261 ---------aattgtcacaggatttataatagaaatcacaccggactccacaaagaacaa 311
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gaacttaataattgtcacaggatttataatagaaatcacaccggactccacaaagaacaa 102
Query: 312 ggaagtcactgccggaatggtctgaagtgaacttccaactgtccaaagtctggcacagaa 371
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 101 ggaagtcaccgccggaatggtctgaagtgaacttccaactgtccaa-gtctggcacggaa 43
Query: 372 g 372
|
Sbjct: 42 g 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_o22.g1 MSMg01no419_o22.g1 CHROMAT_FILE:
MSMg01no419_o22.g1 PHD_FILE: MSMg01no419_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:37 2005
(236 letters)
>mm_chr10_68902071_68902706
Length = 636
Score = 449 bits (232), Expect = e-131
Identities = 235/236 (99%)
Strand = Plus / Plus
Query: 1 acgctcccacccactgatgtcatggaggctcaaacggtccagcccattctcctgttgtca 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgctcccacccactgatgtcaaggaggctcaaacggtccagcccattctcctgttgtca 260
Query: 61 agctggttcttatttatatctgtgagttggtggcctctggtttgctgtgtcctttgagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctggttcttatttatatctgtgagttggtggcctctggtttgctgtgtcctttgagcg 320
Query: 121 ctataatcagtgtggcacagtcgtggttccaatcctatgaatagttctgtcccaagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctataatcagtgtggcacagtcgtggttccaatcctatgaatagttctgtcccaagcagt 380
Query: 181 tcttacatctcacgggtgccttctcttccctgaatcttaattttctcatgagtaat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttacatctcacgggtgccttctcttccctgaatcttaattttctcatgagtaat 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
