Query= MSMg01no420_k15.b1 MSMg01no420_k15.b1 CHROMAT_FILE:
MSMg01no420_k15.b1 PHD_FILE: MSMg01no420_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:35 2005
(342 letters)
>mm_chr10_61819097_61819838
Length = 742
Score = 578 bits (299), Expect = e-169
Identities = 332/343 (96%), Gaps = 2/343 (0%)
Strand = Plus / Plus
Query: 1 tggtgcctgcgacactggctgctttgtgtcacctcgccgggggcaggcctggactgcttt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tggtgcctgcgacactggctgctttgtgtcacctcgccaggggcaggcctggactgcttt 260
Query: 61 ataaactcttggtggcattctgcctggggctggcaaagccagacagggcacaggaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaactcttggtggcattctgcctggggctggcaaagccagacagggcacaggaaggga 320
Query: 121 gcaggggggagggggcagtgacatcccaaataaacctcgtggtttggaaaccctcttctt 180
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 321 gcagggaggagggggcagtgacatcccaaataaagctcgtggtttggaaaccctcttcct 380
Query: 181 ttcccagagcaggaggcactatttttcatgctgcttgaggaatagagggaaaggcaggg- 239
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 381 ttcccagagcaggaggcactatttttcacgctgcttgaggaatagagggaaagg-agggg 439
Query: 240 tggggatgcaggtggggtggcttcagaggtccggagctacaggggccttcatcttggtgt 299
||||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 tgggggtgcgggtggggtgccttcagaggtccggagctacgggggccttcatcttggtgt 499
Query: 300 cctttgtgactcccatgttcccctgtaacccacacaggtgctt 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctttgtgactcccatgttcccctgtaacccacacaggtgctt 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no420_k15.g1 MSMg01no420_k15.g1 CHROMAT_FILE:
MSMg01no420_k15.g1 PHD_FILE: MSMg01no420_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:35 2005
(547 letters)
>mm_chr10_61964823_61965769
Length = 947
Score = 716 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Minus
Query: 1 ctatctgtaactgtgttctttattttaatgtgccattaatttaattagtgtaaaaactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctatctgtaactgtgttctttattttaatgtgccattaatttaattagtgtaaaaactgg 315
Query: 61 gtgggtttcagaatgggacaacttttcctttcgattgctttctttcttgttttattattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtgggtttcagaatgggacaacttttcctttcgattgctttctttcttgttttattattt 255
Query: 121 gttatcttatgaccttgggtgtgtgcatatgtgggtgagcatgcacacccacagggaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gttatcttatgaccttgggtgtgtgcatatgtgggtgagcatgcacacccacagggaggc 195
Query: 181 cacatgaccgctttcgggacatcctcagggacactgtccatctcctttgagacaggtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cacatgaccgctttcgggacatcctcagggacactgtccatctcctttgagacaggtctg 135
Query: 241 tcatttgtctggaactcacaggttaggttagactggctggccagagagcccaggcacttc 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcatttgcctggaactcacaggttaggttagactggctggccagagagcccaggcacttc 75
Query: 301 cctgtttccaccctccccgttgctggggttaaaagtggatacaaccagccctcccgtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cctgtttccaccctccccgttgctggggttaaaagtggatacaaccagccctcccgtttg 15
Query: 361 tagggtcttggata 374
||||||||||||||
Sbjct: 14 tagggtcttggata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
