CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAGATACGCGGA
ATTCACAACCAGCCTCACTCTTTTAAGCTCAGAAACTGGTAGTAACAAAC
TATTTCCATTCAAACAGTTTCAAACATTCAGGCGTTTCAAGTTGGTCACA
GCTACACTTTGAATCATCTAGCCAATGTCCAAGCGAATCAGCTTCCAGGT
CAGAGAACTGAGATCCCTGTGGTTTCCATCAGTCTTGATTGGGTCAGAAG
ACAAGTCATACCCATGGGGATAGTTTAATATAAAGAACTCTTTACTGGGT
ACTGAATTGTTGAACACGCTAAGTTGCCTTGTATACAGGATCTAATCACC
ACCTTTATAAATGAAAACAAAAAGAGGGTAATGGAATTATTTAAATGAGA
AGCTTGGAGAGTGATTCTAGAAAATCCAACACTGAATTCTGAAGAAAGGA
ATTAACTCTACAGAGCTGTGACCTTGGATGGTGTTGGGGGCCTTGGATGG
TGTTGGGGCCTTGGATGGTGTTAGGAGGATGGCAGCTGCCTCCTCCTGGA
AGAGGATGCACCAGTGCAAGAGGATGTGGGTTAGTCCGAGATTTCTAAGG
GAGAACGCTGGTCCTAAGAGATTTGGGGCGGTGCGATTATGATGGTGTTC
TCCCCAGGGAAAAACTAATTTTTTTTGTTATTTAATTGCACCGGCGGAAT
TGTTACCTATATTTTGCTTTGACTTAATATTGTTGGAATTGTTCCTTATT
TAACGTTTGGTATTTTTC

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCAATTCTTTATTCAGTTCTGAGCCCCATTTTT
TAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTGGACAG
CTACATTTTAATATCAGTGAATGGAGTAGCCCAGTGAGCAGGAAATTAGA
TACAAAGCATTCACAGGTACATGATGGTTTGGTGGTATAAGAAACTGAGT
AAATTAGGCTGTTATTTCCATGCATACAAAAAGAAAGATGCAATTGGGCA
AAGTCTTCAGTGAGTGCTTTTGCATCCATTTATCTCAGTAGACATCTTTC
CTATTAGACTTATTACCAGCATTAGGAGCGCCAGAGCTTCAGGACCAAAA
TTGCCAGCTCCAGATCAGACAAACAGCCTCTGATAGAGGATCTTTGTCTC
AATCTGCACATGTTGCTCAAAGATTTAAATATTGCTGTTAATATAGGCAT
ACTATGTGTGGATCTATAGATGCCACCCTGAACTCATCTGATCTCAGATG
CTAAGCTAGGTTGCATAGGAGGGTATTACATGTGGGAAACATGGTAGAAA
TGAGAACTTGTCGACAAAACTCAGTATAAAGGGTGATTTTACCTTTATAA
ATTATACAAAGCTTTCTAATTTGAGGCAAGGGCCAGACTTGATATAGTGT
AAGATATGGGATTTTTTTTCTGCAAAAGGCCAGAGAATATATTTTTAATA
AAAAATCTCTTCGGTAACAN

Query= MSMg01no421_a03.b1 MSMg01no421_a03.b1 CHROMAT_FILE:
MSMg01no421_a03.b1 PHD_FILE: MSMg01no421_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:01 2005
         (460 letters)



>mm_chr10_44545233_44546092
          Length = 860

 Score =  835 bits (432), Expect = 0.0
 Identities = 453/460 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttaagctcagaaactggtagtaacaaactatttccattcaaacagtttcaaacattcag 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tttaagctcagaaactagtagtaacaaactatttccattcaaacagtttcaaacattcag 601

                                                                       
Query: 61  gcgtttcaagttggtcacagctacactttgaatcatctagccaatgtccaagcgaatcag 120
           || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gcatttcaagttggccacagctacactttgaatcatctagccaatgtccaagcgaatcag 541

                                                                       
Query: 121 cttccaggtcagagaactgagatccctgtggtttccatcagtcttgattgggtcagaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cttccaggtcagagaactgagatccctgtggtttccatcagtcttgattgggtcagaaga 481

                                                                       
Query: 181 caagtcatacccatggggatagtttaatataaagaactctttactgggtactgaattgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caagtcatacccatggggatagtttaatataaagaactctttactgggtactgaattgtt 421

                                                                       
Query: 241 gaacacgctaagttgccttgtatacaggatctaatcaccacctttataaatgaaaacaaa 300
           ||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaacatgctaagttgtcttggaaacaggatctaatcaccacctttataaatgaaaacaaa 361

                                                                       
Query: 301 aagagggtaatggaattatttaaatgagaagcttggagagtgattctagaaaatccaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aagagggtaatggaattatttaaatgagaagcttggagagtgattctagaaaatccaaca 301

                                                                       
Query: 361 ctgaattctgaagaaaggaattaactctacagagctgtgaccttggatggtgttgggggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctgaattctgaagaaaggaattaactctacagagctgtgaccttggatggtgttgggggc 241

                                                   
Query: 421 cttggatggtgttggggccttggatggtgttaggaggatg 460
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cttggatggtgttggggccttggatggtgttaggaggatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space:   382500
Effective search space used:   382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no421_a03.g1 MSMg01no421_a03.g1 CHROMAT_FILE:
MSMg01no421_a03.g1 PHD_FILE: MSMg01no421_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:01 2005
         (540 letters)



>mm_chr10_44387553_44388492
          Length = 940

 Score = 1029 bits (532), Expect = 0.0
 Identities = 538/540 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattctttattcagttctgagccccattttttaatggggttatttgattttctggagtcc 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctttgttcagttctgagccccattttttaatggggttatttgattttctggagtcc 260

                                                                       
Query: 61  accttcttgagttctggacagctacattttaatatcagtgaatggagtagcccagtgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accttcttgagttctggacagctacattttaatatcagtgaatggagtagcccagtgagc 320

                                                                       
Query: 121 aggaaattagatacaaagcattcacaggtacatgatggtttggtggtataagaaactgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaattagatacaaagcattcacaggtacatgatggtttggtggtataagaaactgag 380

                                                                       
Query: 181 taaattaggctgttatttccatgcatacaaaaagaaagatgcaattgggcaaagtcttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaattaggctgttatttccatgcatacaaaaagaaagatgcaattgggcaaagtcttca 440

                                                                       
Query: 241 gtgagtgcttttgcatccatttatctcagtagacatctttcctattagacttattaccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgagtgcttttgcatccatttatctcagtagacatctttcctattagacttattaccag 500

                                                                       
Query: 301 cattaggagcgccagagcttcaggaccaaaattgccagctccagatcagacaaacagcct 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattaggagcaccagagcttcaggaccaaaattgccagctccagatcagacaaacagcct 560

                                                                       
Query: 361 ctgatagaggatctttgtctcaatctgcacatgttgctcaaagatttaaatattgctgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgatagaggatctttgtctcaatctgcacatgttgctcaaagatttaaatattgctgtt 620

                                                                       
Query: 421 aatataggcatactatgtgtggatctatagatgccaccctgaactcatctgatctcagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatataggcatactatgtgtggatctatagatgccaccctgaactcatctgatctcagat 680

                                                                       
Query: 481 gctaagctaggttgcataggagggtattacatgtgggaaacatggtagaaatgagaactt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctaagctaggttgcataggagggtattacatgtgggaaacatggtagaaatgagaactt 740


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space:   492900
Effective search space used:   492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)