Query= MSMg01no421_h24.b1 MSMg01no421_h24.b1 CHROMAT_FILE:
MSMg01no421_h24.b1 PHD_FILE: MSMg01no421_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:42 2005
(473 letters)
>mm_chr10_95914486_95915358
Length = 873
Score = 876 bits (453), Expect = 0.0
Identities = 468/473 (98%)
Strand = Plus / Plus
Query: 1 gttcctttgtctgaaaagctaagatctctctagaggttaacccaaggaatatagaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcctttgtctgaaaagctaagatctctctagaggttaacccaaggaatatagaccaaa 260
Query: 61 gacaggaaatgctgtgactctgagggaggctgtggacactccacctggtctatcctgcta 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gacaggaaatgctgtgactctgagggaggctggggacactccacctggtctatcctgcta 320
Query: 121 gtgtggtgccatcagaagaaagggagtgcagccgagggagctgctggagctaccccaaga 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 gtgtggtgccatcagaagaaagggagtgcagccaagggagctgctggagctaccccaaga 380
Query: 181 acctgtttaacaagagtgagagaaatgtaaatcctaaacaggaacctgaagtcaatcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctgtttaacaagagtgagagaaatgtaaatcctaaacaggaacctgaagtcaatcatt 440
Query: 241 ctaaataggaacctatcttgccagatgtggtcctcattccttgtgttgatcccgcccccc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaataggaacctagcttgccagatgtggtcctcattccttgtgttgatcccgcccccc 500
Query: 301 tgcacccaccctccccccacccacgctctcttctttcctgacagtgagtagcatggcttc 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcacccaccctccccccacccacactctcttctttcctgacagtgagtagcatggcttc 560
Query: 361 tcattactgaaaagcactgctgccttctcctgacagcccgagtctgagattcagctcaga 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tcattactgaaaagcactgctgccttctcctgacagctcgagtctgagattcagctcaga 620
Query: 421 atctcagacgctaatgacagatgctgtgcaatgttatgagtgtgaagcttgaa 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atctcagacgctaatgacagatgctgtgcaatgttatgagtgtgaagcttgaa 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_h24.g1 MSMg01no421_h24.g1 CHROMAT_FILE:
MSMg01no421_h24.g1 PHD_FILE: MSMg01no421_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:42 2005
(402 letters)
>mm_chr10_96098163_96098961
Length = 799
Score = 617 bits (319), Expect = 0.0
Identities = 383/415 (92%), Gaps = 21/415 (5%)
Strand = Plus / Minus
Query: 1 atcttgacaaatgaatctttgaaaaatgaaaacacaacaaccaaataacttaaaatattt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 atcttgacaaacgaatctttgaaaaatgaaaacacaacaaccaaataacttaaaatattt 648
Query: 61 aacagagtgtatactcagccaactaggtctctactctgca--------gaacctagcacc 112
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 647 aacagagtgtatactcagccaactaggtctctactctgcagaactcaggaacctagcaca 588
Query: 113 gacgggcccaactttctgtctgaaaaa--tttttttttcaatttctaaacatcacttttt 170
|| | ||||||||||| ||||| || ||||||||||||||||||| ||||||
Sbjct: 587 gaagagcccaactttcggtctg---aatttttttttttcaatttctaagcatcac----- 536
Query: 171 tttttttttt---aaaacaatagaaagatgtttcgatcactataggacaaaaacttaact 227
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttttttttttaaaaaaacaatagaaagatgtttcgatcactataggacaaaaacttaact 476
Query: 228 ttttttttttttttcagtcagacaagttctgcaaacctccatctatttttttccttctcc 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctttttttttttttcagtcagacaagttctgcaaacctccatctatttttttccttctcc 416
Query: 288 cagggaacttccaaagtttatgttcaggagaaagaattctatctacactcagcaaatggg 347
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 415 cagtgaacttccaaagtttatgttcaggagaaagaattctatctacactcagcaactggg 356
Query: 348 ctcataacagggaagacactaaacaaaacttcattctccagggctccaaatctcc 402
||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 355 ctcataatagggaagacactaaacaaaccttcattctccagggctccaaatctcc 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 799
Length adjustment: 9
Effective length of query: 393
Effective length of database: 790
Effective search space: 310470
Effective search space used: 310470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
