Query= MSMg01no422_f20.b1 MSMg01no422_f20.b1 CHROMAT_FILE:
MSMg01no422_f20.b1 PHD_FILE: MSMg01no422_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:48 2005
(319 letters)
>mm_chr10_98388429_98389150
Length = 722
Score = 526 bits (272), Expect = e-154
Identities = 309/328 (94%), Gaps = 15/328 (4%)
Strand = Plus / Plus
Query: 5 gaattctagccagt--tccgcagaagcctgggagctgctcagttattgtttcagaggtcc 62
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagccagtgat--ggagaagcctgggagctgctcagttattgtttcagaggtcc 262
Query: 63 tcaagggctctgtgacca---tcctcatctgtccaggttccagaagcctgtcttttgtct 119
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 263 tcaagggctctgtgaccatcctcctcatctctccaggttccagaagcctgtcttttgtct 322
Query: 120 tctggggaatacattgagacccacagcagcaaaccaagataccatagtcccagtgcagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctggggaatacattgagacccacagcagcaaaccaagataccatagtcccagtgcagat 382
Query: 180 cccggccaccccttgttaatctgtgctggccagcaatggagagttctctgactcaaggag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cccggccaccccttgttaatctgtgctggccagcaatggagagttctctgactcaaggag 442
Query: 240 aatgacttgagaatcctgatttgtgtgaagaaagaaagaatgagagag--ag------ag 291
||||||||||||||||||||||||||||||||||||| || ||||||| || ||
Sbjct: 443 aatgacttgagaatcctgatttgtgtgaagaaagaaaaaaagagagagggagggagggag 502
Query: 292 ggagggagggagggaaggagagagagag 319
||||||||||||||||||||||||||||
Sbjct: 503 ggagggagggagggaaggagagagagag 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_f20.g1 MSMg01no422_f20.g1 CHROMAT_FILE:
MSMg01no422_f20.g1 PHD_FILE: MSMg01no422_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:48 2005
(534 letters)
>mm_chr10_98605053_98605987
Length = 935
Score = 1004 bits (519), Expect = 0.0
Identities = 531/535 (99%), Gaps = 1/535 (0%)
Strand = Plus / Minus
Query: 1 accacatagaaacaaaagacatacagaaatgtcattaactctgtgagctcttaaagcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 accacatagaaacaaaagacatacagaaatgtcattaactctgtgagctcttaaagcgca 556
Query: 61 ggaaagtccttcaaggaggaaaatcttccattcttagtagtttccaatgattttaaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggaaagtccttcaaggaggaaaatcttccattcttagtagtttccaatgattttaaaatg 496
Query: 121 acaagtaatatcttactaatcttttcctccagaaaatacatgagaggtattcaaatatgg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acaagtaatatcttactattcttttcctccagaaaatacatgagaggtattcaaatatgg 436
Query: 181 agaatagtattaatattacaaacctaaattataaaacc-aaaaaaaaaaaaaccccacca 239
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 435 agaatagtattaatattacaaacctaaattataaaaccaaaaaaaaaaaaaaacccacca 376
Query: 240 aaacccaacctccccaaccccttcaaaactccccaacatgtaaatctcctcaaaaatgta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaacccaacctccccaaccccttcaaaactccccaacatgtaaatctcctcaaaaatgta 316
Query: 300 cttgccatgaacttgggagaaaaaaatgtactcattatctccatggaaataagcttcaaa 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cttgtcatgaacttgggagaaaaaaatgtactcattatctccatggaaataagcttcaaa 256
Query: 360 gtaaatatagacttgcaagggatcaatttacattgctttctccttctcctcctgctgaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtaaatatagacttgcaagggatcaatttacattgctttctccttctcctcctgctgaga 196
Query: 420 gaggatcttactatggatcctggctgctgtagaactctgcgtagaccaggctggccttga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaggatcttactatggatcctggctgctgtagaactctgcgtagaccaggctggccttga 136
Query: 480 actcccagaatccacctgtctctgtctctagaacgctgggactaatgatatgcat 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 actcccagaatccacctgtctctgtctctagaacgctgggactaatgatatgcat 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
