Query= MSMg01no423_d05.b1 MSMg01no423_d05.b1 CHROMAT_FILE:
MSMg01no423_d05.b1 PHD_FILE: MSMg01no423_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:49 2005
(247 letters)
>mm_chr10_19848614_19849260
Length = 647
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%)
Strand = Plus / Minus
Query: 1 ccatcacttaaaagttggtgatgttctaagatatgttgcatggatccttttggctttcta 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 ccatcacttaaaagttggtgatgttctaagatatgatgcatggatccttttggctttcta 386
Query: 61 tgtcttaactttaagatgcaggcacaaaacttaacatcagcacatgtgtctaattcatgc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatcttaactttaagatgcaggcacaaaacttaacatcagcacatgtgtctaattcatgc 326
Query: 121 atgtgggtctctctaatggacggacctgtctagtgacctctgcttaaaagttttgactac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 atgtgggtctctctaatggacggacctgtctagtgacctctgcttaaaagttttgagtac 266
Query: 181 tgaataaactgtccaggtacttcagaggtttgtcttgcagcaggaagacactcctcactc 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 tgaataaactgtccaggtacttcagaggtttgtcttggagcaggaagacactcctcactc 206
Query: 241 atgtc 245
|||||
Sbjct: 205 atgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no423_d05.g1 MSMg01no423_d05.g1 CHROMAT_FILE:
MSMg01no423_d05.g1 PHD_FILE: MSMg01no423_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:49 2005
(440 letters)
>mm_chr10_19644905_19645744
Length = 840
Score = 801 bits (414), Expect = 0.0
Identities = 434/441 (98%), Gaps = 1/441 (0%)
Strand = Plus / Plus
Query: 1 ttttccccccatgtttttgctttaacagagtgcatttctatacaaataatactgttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttttccccccatgtttttgctttaacagagtgcatttctatacaaataatactgttttta 259
Query: 61 aaatatactcttgtccttttgcaatttaatgttttgggcatttatttaagtatgtctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaatatactcttgtccttttgcaatttaatgttttgggcatttatttaagtatgtctcat 319
Query: 121 atgtgtgtgtgtgtaatagacacacatgtatacacacacacacatacaagtatatgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgtgtgtgtgtgtaatagacacacatgtatacacacacacacatacaagtatatgtgat 379
Query: 181 gtcctgatctcagataaagtaagtatacccttttcacttttttttt-ctttttctttttg 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 gtcctgatctcagataaagtaagtatacccttttcacttttttttttctttttctttttg 439
Query: 240 agacagtttttttttatgtagtcctagaaggccttgaactcatgattctagtttcagctt 299
|||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 440 agacagggttttactatgtagtcttagaaggccttgaactcatgattctagtttcagctt 499
Query: 300 cctgagttctggtattacaggactgcaccaatgtgtccattccacactgggatgtggaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctgagttctggtattacaggactgcaccaatgtgtccattccacactgggatgtggaaa 559
Query: 360 gtgatataaacgttcaattctcctcctccttcttgncagttcaccaacattatccgtgtt 419
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 gtgatataaacgttcaattctcctcctccttcttgtcagttcaccaacattatccgtgtt 619
Query: 420 tgacaaatttgtttttgtagc 440
|||||||||||||||||||||
Sbjct: 620 tgacaaatttgtttttgtagc 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
