Query= MSMg01no423_i18.b1 MSMg01no423_i18.b1 CHROMAT_FILE:
MSMg01no423_i18.b1 PHD_FILE: MSMg01no423_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:15 2005
(269 letters)
>mm_chr10_67835204_67835872
Length = 669
Score = 460 bits (238), Expect = e-134
Identities = 257/264 (97%), Gaps = 2/264 (0%)
Strand = Plus / Plus
Query: 5 gaattctagtttgaccctgacatcaaaatcacttggaaaacaatcctcagttaaccagaa 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagtttgagtctgacatcaaaatcacttggaaaacaatcctcagttaaccagaa 264
Query: 65 aaggccatgtggtgagttcaagaactaaatatttgcacttgaatactgttggattttgtg 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggccatgtggtgagttcaagaaataaatatttgcacttgaatactgttggattttgtg 324
Query: 125 ttgtttactatagcactagaattctggttcatacttattgatgaatgaatagaaaataag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtttactatagcactagaattctggttcatacttattgatgaatgaatagaaaataag 384
Query: 185 taagaagttttatttttacaggtatgtgtaggtgtgtgtgtgtgtgtgtgtttctgcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 taagaagttttatttttacaggtatgtgtaggtgtgtgtgtgtgtgtgt--ttctgcatg 442
Query: 245 tgacttcagtacctgtacagatca 268
||| ||||||||||||| ||||||
Sbjct: 443 tgagttcagtacctgtagagatca 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no423_i18.g1 MSMg01no423_i18.g1 CHROMAT_FILE:
MSMg01no423_i18.g1 PHD_FILE: MSMg01no423_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:15 2005
(349 letters)
>mm_chr10_67988084_67988832
Length = 749
Score = 629 bits (325), Expect = 0.0
Identities = 343/349 (98%)
Strand = Plus / Minus
Query: 1 tttaagaggtgtagtgctcgagaacttttattcaaatacttgctttcaaaacttccggag 60
|||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 549 tttaagaggtgtagcgttcgagaacttatattcaaatacttgctttcaaaacttccggag 490
Query: 61 actgttcactattcaatctcactttaacatctgcatttttcttctttgtcattacagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 actgttcactattcaatctcactttaacatctgcatttttcttctttgtcattacagaaa 430
Query: 121 actgggagtgtttctgaattttaaaaatctccagacttgcctgcgtgacgccatcctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actgggagtgtttctgaattttaaaaatctccagacttgcctgcgtgacgccatcctctt 370
Query: 181 ggactactatgtgtctggcttctgttgggccaaggagatgaacttttctatcgagcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 369 ggactactatgtgtctggcttctgttgggccaaggagatgaacttttctattgagcagta 310
Query: 241 ttcctagtttatgaccttgctggacatgctacttcataatcttcaaagtgagtgtgatcc 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttccaagtttatgaccttgctggacatgctacttcataatcttcaaagtgagtgtgatcc 250
Query: 301 ctcgctgtcgttttaaggggagggaatgcagtgtatgtaaattaatatt 349
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 249 ctcgctgtcgttttaaggggagggaatgcagtatatgtaaattaatatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|