Query= MSMg01no423_m15.b1 MSMg01no423_m15.b1 CHROMAT_FILE:
MSMg01no423_m15.b1 PHD_FILE: MSMg01no423_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:33 2005
(564 letters)
>mm_chr10_67769037_67770000
Length = 964
Score = 969 bits (501), Expect = 0.0
Identities = 529/545 (97%), Gaps = 11/545 (2%)
Strand = Plus / Plus
Query: 20 gactctgaaccagcacttaatgtatggaggtacataccctctagtgagttacccaaagcc 79
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 231 gactctgaaccagcacttaatgtatggaggta-----------gtgagttacccaaagcc 279
Query: 80 cagagctgaagttggatgagacaataaacattatttgtaattccatggaagaaaggtcca 139
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 280 cagagctgaagttggatgagacaataaatattatttgtaattccatggaagaaaggtcca 339
Query: 140 ttcatattggcggccatcactgaggatgcatggtggacggagaggtgcttatttgtttat 199
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 340 ttcatattggcggccatcactgaggatgcatggtggacagagaggtgcttatttgtttat 399
Query: 200 taacatcacaagttctgactagcctcttgctagagtgtagtagacatggttcaagcattg 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 taacatcacaagttctgactagcctcttgctagagtgtagtagacatggttcaagcattg 459
Query: 260 gggaattgagtgtgtacgacgaaaaagaatactgtatcaaacttgtactataatgagttg 319
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gggaattgagtgtgaacgacgaaaaagaatactgtatcaaacttgtactataatgagttg 519
Query: 320 atctgagctgttgaagctgtctgcacccagctaaatagctcttccacctctttctgtcac 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atctgagctgttgaagctgtctgcacccagctaaatagctcttccacctctttctgtcac 579
Query: 380 actgggaagaaacagaaaatttagggttgagtctggatcagaatgtcagttgtcctgctc 439
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 580 actgggaagaaacagaaaatttagggttgagtctggatcagaatgtcagctgtcctgctc 639
Query: 440 ctaggacaataattgcttgcatctgagctacctagccagggaagaagactcatatcaatt 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ctaggacaataattgcttgcatctgagctacctagccagggaagaagactcatatcaatt 699
Query: 500 ctctgatttttctgcttctactttgattaaaaacaaaacaaaacaaaacaaaaccaaaca 559
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 700 ctctgatttttctgcttctactttgattaaaaacaaaacaaaacaaaacaaaacaaaaca 759
Query: 560 aaaca 564
|||||
Sbjct: 760 aaaca 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_m15.g1 MSMg01no423_m15.g1 CHROMAT_FILE:
MSMg01no423_m15.g1 PHD_FILE: MSMg01no423_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:33 2005
(412 letters)
>mm_chr10_67839263_67840074
Length = 812
Score = 750 bits (388), Expect = 0.0
Identities = 406/412 (98%)
Strand = Plus / Minus
Query: 1 tgcaggggggcgggcataagaggagaatcctggggactcactgggtgtttgaagggctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tgcaggggggcgggcataagaggagaatcctggggactcactgggtgtttgaagggctca 735
Query: 61 tctgtcaatcactcttggaattacttggtagctggaagcaagaggatcagaaattcaagg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tctgtcaaccactcttggaattacttggtagctggaagcaagaggatcagaaattcaagg 675
Query: 121 ttatcctcaattgggtttgggtccagcctgggctatatgagatcctatctaagaaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttatcctcaattgggtttgggtccagcctgggctatatgagatcctatctaagaaaagaa 615
Query: 181 aagtaaagaggaaagaggaagtggggagttgagtcttagaaaaaagatttagggaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aagtaaagaggaaagaggaagtggggagttgagtcttagaaaaaagatttagggaaaaca 555
Query: 241 tttcttatgaatggagagatgtctgttgaaataggaggtaaccagtactacaggcatctc 300
|| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttccaaaggaatggagagatgtctgttgaaataggaggtaaccagtactacaggcatctc 495
Query: 301 ttcctagaggcacaatgggggaaaaacggagaggctatttaaaggacaataagcatatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttcctagaggcacaatgggggaaaaacggagaggctatttaaaggacaataagcatatta 435
Query: 361 gcaccaacctacaaaaggcttgtgatgatcctgcgggcttacttttaggctc 412
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 434 gcaccaacctacaaaaggcttgtgatgatcctgcaggcttacttttaggctc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
