Query= MSMg01no424_b22.b1 MSMg01no424_b22.b1 CHROMAT_FILE:
MSMg01no424_b22.b1 PHD_FILE: MSMg01no424_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:59 2005
(540 letters)
>mm_chr10_27048246_27049184
Length = 939
Score = 1023 bits (529), Expect = 0.0
Identities = 537/540 (99%), Gaps = 1/540 (0%)
Strand = Plus / Plus
Query: 1 acagcattttcctgatcttaataaatagaaaagagggaaactttcttccagcttaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcattttcctgatcttaataaatagaaaagagggaaactttcttccagcttaatttt 260
Query: 61 ttttacaatgttttcatttgcacacttgcctagtaagttattaatatagtaatattatgg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttt-acaatgttttcatttgcacacttgcctagtaagttattaatatagtaatattatgg 319
Query: 121 aaaatattcttgtttggtgcctgttctccagattagtctcattaaatctcatcccagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaatattcttgtttggtgcctgttctccagattagtctcattaaatctcatcccagtac 379
Query: 181 atggaaaacatatttgcttataggtgaagctataatgtgtgctcagaggaatgaaagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atggaaaacatatttgcttataggtgaagctataatgtgtgctcagaggaatgaaagctg 439
Query: 241 actataaatgaaagtctgggcagggtgtaatctctccaagaagtggttaatcctgaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 actataaatgaaagtctgggcagggtgtaatctctccaagaagtggttaatcctgaccaa 499
Query: 301 gacttccagatgaaggcttctttctacaggaaatagatgtctagcatcctaggcatgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacttccagatgaaggcttctttctacaggaaatagatgtctagcatcctaggcatgtgt 559
Query: 361 gattactcatattctcttccttgcattcttcttcttcctcattgtgcagcattccttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gattactcatattctcttccttgcattcttcttcttcctcattgtgcagcattccttctt 619
Query: 421 tcaggagctaacttttttcccagctctttctatagccttaaaagcattcctttattataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcaggagctaacttttttcccagctctttctatagccttaaaagcattcctttattataa 679
Query: 481 gctcanaactatatcctggcatataaagattattctctcctaacacatgtaatatttagc 540
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 gctcaaaactatatcctggcatataaagattattctctcctaaaacatgtaatatttagc 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 939
Length adjustment: 10
Effective length of query: 530
Effective length of database: 929
Effective search space: 492370
Effective search space used: 492370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_b22.g1 MSMg01no424_b22.g1 CHROMAT_FILE:
MSMg01no424_b22.g1 PHD_FILE: MSMg01no424_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:59 2005
(496 letters)
>mm_chr10_27233335_27234230
Length = 896
Score = 899 bits (465), Expect = 0.0
Identities = 489/497 (98%), Gaps = 2/497 (0%)
Strand = Plus / Minus
Query: 1 tcttccacaaagtgcaaagtttggtaatgatggtgatctatgtatatgagatgcttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tcttccacaaagtgcaaagtttggtaatgatggtgatctatgtatatgagatgcttaaaa 637
Query: 61 taaagagaagatgttatggttatatcggaagctagcttctcttctgttggatccacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 taaagagaagatgttatggttatatcggaagctagcttctcttctgttggatccacacag 577
Query: 121 caattctttaattacattttaaaagtggcttaaaatggtctctgtgttcttctaaggtct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 caattctttaatcacattttaaaagtggcttaaaatggtctctgtgttcttctaaggtct 517
Query: 181 cacaatggcatctgtagttcctaacatacatataaatcactcattctcaagtcagcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cacaatggcatctgtagttcctaacatacatataaatcactcattctcaagtcagcaagt 457
Query: 241 cacatacagaacgtgaaagccaataagtgatgcagagtcagggactgcaaaggggataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cacatacagaacgtgaaagccaataagtgatgcagagtcagggactgcaaaggggataaa 397
Query: 301 tctgaaggggagtga-gttttcatctcttttgagacatggaagtcattgatgcttctcac 359
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctgaaggggagt-atgttttcatctcttttgagacatggaagtcattgatgcttctcac 338
Query: 360 aggtgatcagcttttaaaatctcaattattgagtagcatgcacatggcatgcatgtggaa 419
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 337 aggtgatcagcttttaaaatctcagttattgagttgcatgcacatggcatgcatgtggaa 278
Query: 420 gggttaagtatcagaaggtaccttggtggttctaggccaaggtgtgctgcaaatatcatg 479
|||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 277 gggttaagtaacagaaggcaccttggtggttctaggccaaggtgtgatgcaaatatcatg 218
Query: 480 tcacacaacaaatctaa 496
|||||||||||||||||
Sbjct: 217 tcacacaacaaatctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
