Query= MSMg01no424_g19.b1 MSMg01no424_g19.b1 CHROMAT_FILE:
MSMg01no424_g19.b1 PHD_FILE: MSMg01no424_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:23 2005
(602 letters)
>mm_chr10_23747867_23748865
Length = 999
Score = 1031 bits (533), Expect = 0.0
Identities = 581/601 (96%), Gaps = 9/601 (1%)
Strand = Plus / Plus
Query: 5 gaattcctcattacca---acctgtttcctgaatagattcttggtttagtcggggattgg 61
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctca--accaccaacctgtttcctgaatagattcttggtttagtcggggattgg 262
Query: 62 agagattcacagcagaaaatcactggggagactgagtgcccagccctgttactgttaagt 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agagattcccagcagaaaatcactggggagactgagtgcccagccctgttactgttaagt 322
Query: 122 ggtgaattatgcttcagctgggaactgaacacataaatctagcttctgtattttcaataa 181
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtgaattatgcttcagctgggacctgaacacataaatctagcttctgtattttcaataa 382
Query: 182 atgtaaaattaatttctagatgtaatggaattagatgagcttgggtctgaccatttccta 241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 383 atgtaaaattaatttctagatgtaatggaattagatgagcttggatctgaccatttccta 442
Query: 242 ctgtgtccccttctggtttgtgtcattttttttccctgaatcagtgacccttttcttgcc 301
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 443 ctgtgtccccttctggtttgtgtcatttgttttccctgaatcagtgacccttttcttgcc 502
Query: 302 ctctataaaattctatttgttgactgtcgttaaatgttttaagcctcaaatttgaatata 361
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 503 ctctataaaattctatttgttgaccgccgttaaatgttttaagcctcaaatttgaatata 562
Query: 362 tagtctttaattccctttgtagtaggaaataagacactgagactcttaggggctgtctct 421
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 563 tagtctttaattccctttgtagtaggaaataagacaccaagactcttaggggctgtttct 622
Query: 422 tgctcagcatagagtcatatgcaggactctattaactgagcccaagttttgagcggttaa 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 623 tgctcagcatagagtcatatgcaggactctattaactgagcccaagttttgagcagttaa 682
Query: 482 aaatatgattcttaaggtaagaaaaatatgccaagatgtttatgtattaactaacatcta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaatatgattcttaaggtaagaaaaatatgccaagatgtttatgtattaactaacatcta 742
Query: 542 ctcagttgtgtatagaagaaagagaaaacagtgtcacaaacagccacatctcctcagtga 601
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 743 ctcagttgtgtatagaagaaagagaaaacagtgtcaca----gtcacatctcctcagtga 798
Query: 602 c 602
|
Sbjct: 799 c 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 999
Length adjustment: 10
Effective length of query: 592
Effective length of database: 989
Effective search space: 585488
Effective search space used: 585488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_g19.g1 MSMg01no424_g19.g1 CHROMAT_FILE:
MSMg01no424_g19.g1 PHD_FILE: MSMg01no424_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:23 2005
(245 letters)
>mm_chr10_23865350_23865993
Length = 644
Score = 352 bits (182), Expect = e-101
Identities = 224/246 (91%), Gaps = 16/246 (6%)
Strand = Plus / Minus
Query: 1 catctttaa-acataaaccttaggagacacagcaaacatagctacctgg-ttttttgttt 58
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 517 catctttaacacataaaccttaggagacacagcaaacatagctacctggtttttttgttt 458
Query: 59 ttgttttttgttttgttttgttttgttgtcattactttttaaacagtttctacgggcctc 118
|||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 457 ttgttttttgtt-------------ttgtcattactttttaaacagtttccacgggcctc 411
Query: 119 ttcttcttgtctcattgtctattccctgtctgcttcagtagcaatgaaagtggtcaattc 178
|||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 410 ttctacttgtctcattgtctattccctgtctgttttagtagcaatgaaagtggtcaattc 351
Query: 179 attttctgctccattttcttaccaccatagcagctactcatgcactggaagcctgacccc 238
| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 350 a-gttctgctccattttcttaccaccatagcagctactcacgcactggaagcctgacccc 292
Query: 239 gaaacc 244
||||||
Sbjct: 291 gaaacc 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
