Query= MSMg01no424_h24.b1 MSMg01no424_h24.b1 CHROMAT_FILE:
MSMg01no424_h24.b1 PHD_FILE: MSMg01no424_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:28 2005
(502 letters)
>mm_chr10_96311121_96312024
Length = 904
Score = 946 bits (489), Expect = 0.0
Identities = 500/505 (99%), Gaps = 4/505 (0%)
Strand = Plus / Minus
Query: 1 gctacatagatgctaataacatttgatttttcttcctgataataattatctaacaatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gctacatagatgctaataacatttgatttttcttcctgataataattatctaacaatgag 517
Query: 61 aaatatacatgggggaaaaaaagggcaaaactttcttcttgtttctaaaagaaggagaga 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaatatacat-ggggaaaaaaagggcaaaactttcttcttgtttctaaaagaaggagaga 458
Query: 121 gaaggaaattttgtatccagtgcacagaggaaaacactagattgaataattcataagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaaggaaattttgtatccagtgcacagaggaaaacactagattgaataattcataagtgg 398
Query: 181 taaagaatgtgagaagcattcatgtgtgcaagtatgtttctcaagccagaaatgcctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 taaagaatgtgagaagcattcatgtgtgcaagtatgtttctcaagccagaaatgcctggc 338
Query: 241 ttaacaaatccaggtcttagtcttgtaatagc---aaaaaaaaaaaaaaaaagatgagca 297
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 337 ttaacaaatccaggtcttagtcttgtaatagcaaaaaaaaaaaaaaaaaaaagatgagca 278
Query: 298 aagaaaatctggcagtagttgaacttaccacttgcaaggagagtggccacaaaagccaga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aagaaaatctggcagtagttgaacttaccacttgcaaggagagtggccacaaaagccaga 218
Query: 358 tggcaaccgctcttgatggggctgcaggtgtggttctatggtggaacacttgcctagcat 417
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 217 tggcaaccgctcttgatggggctggaggtgtggttctatggtggaacacttgcctagcat 158
Query: 418 gagctggacataggtccaagccctccaagctaaaataaaaaagaaaggaagggaagaagg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gagctggacataggtccaagccctccaagctaaaataaaaaagaaaggaagggaagaagg 98
Query: 478 aaggagggagggagggaggaaggag 502
|||||||||||||||||||||||||
Sbjct: 97 aaggagggagggagggaggaaggag 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 904
Length adjustment: 10
Effective length of query: 492
Effective length of database: 894
Effective search space: 439848
Effective search space used: 439848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_h24.g1 MSMg01no424_h24.g1 CHROMAT_FILE:
MSMg01no424_h24.g1 PHD_FILE: MSMg01no424_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:28 2005
(560 letters)
>mm_chr10_96165007_96165966
Length = 960
Score = 1075 bits (556), Expect = 0.0
Identities = 559/560 (99%)
Strand = Plus / Plus
Query: 1 cagaaatctataaatagaggcagcactagagtattgaggagctttgcaacaagatgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaatctataaatagaggcagcactagagtattgaggagctttgcaacaagatgctgg 260
Query: 61 ctttagaaaagtagatgatactttgatattaagtttagccaggttcattctagttaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttagaaaagtagatgatactttgatattaagtttagccaggttcattctagttaggat 320
Query: 121 gaagtcactttcttcctaatttatatcataccctccccctttgtccccagggatctgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagtcactttcttcctaatttatatcataccctccccctttgtccccagggatctgctt 380
Query: 181 ggttggttttgataaagtcaacaactgtacttccattaacaagtccttccaatacattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttggttttgataaagtcaacaactgtacttccattaacaagtccttccaatacattgc 440
Query: 241 tcttggtaaacttatctgccaaccttcccaaggtagcctctttagaatctctcttttggc 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tcttggtaaacttatctgccaaccttccccaggtagcctctttagaatctctcttttggc 500
Query: 301 atgttggggtcagttgtgtattggagccatgttgttctagagaggcatgctaaattagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgttggggtcagttgtgtattggagccatgttgttctagagaggcatgctaaattagag 560
Query: 361 atgattctgggggatcttaatcttctcagacaagggtaagagagtctagatgtgggtggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgattctgggggatcttaatcttctcagacaagggtaagagagtctagatgtgggtggt 620
Query: 421 agttttacatcagctgagttgggtctttgagtacctaagggagggtgcatttaagcagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttttacatcagctgagttgggtctttgagtacctaagggagggtgcatttaagcagga 680
Query: 481 gactgcagaaagggaaaggcagtgaaacaggaattcagaatggtgtttagaaagtcagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gactgcagaaagggaaaggcagtgaaacaggaattcagaatggtgtttagaaagtcagga 740
Query: 541 aaatggaagggcaaaagcta 560
||||||||||||||||||||
Sbjct: 741 aaatggaagggcaaaagcta 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
