Query= MSMg01no424_l11.b1 MSMg01no424_l11.b1 CHROMAT_FILE:
MSMg01no424_l11.b1 PHD_FILE: MSMg01no424_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:44 2005
(589 letters)
>mm_chr10_94972352_94973339
Length = 988
Score = 924 bits (478), Expect = 0.0
Identities = 508/518 (98%), Gaps = 1/518 (0%)
Strand = Plus / Minus
Query: 4 ggaattcacattttctccaaaacaggaagctgagacagaaggaatcccagacgaacttcg 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 519 ggaattcacattaactccaaaacaggaagctgagacagaaggaatcccagacgaacttgg 460
Query: 64 actgcatggtctgtgtgtatatcataggatcctgtctcaaaaacctaaaagcagaggagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 actgcatggtctgtgtgtatatcataggatcctgtctcaaaaacctaaaagcagaggagg 400
Query: 124 aaaggggaagggtttagaccatggattgttgttctcgctgtttggggacctctggagaaa 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 399 aaaggggaagggtttagaccatggattgttgttct-gctgtttggggacctctggagaaa 341
Query: 184 tagcatcatggagggaacatgtgacagaggaaaccgtttactgtgctgctggaaaagcaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tagcatcatggagggaacatgtgacagaggaaaccgtttactgtgctgctggaaaagcaa 281
Query: 244 ctaaagatgacaagaagctggaatctcaatgctctccttgagggtgtacactggtcaaaa 303
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 280 ctaaagatgacaagaagctggaatctcaatgttctcctcgagggtgtacactggtcaaaa 221
Query: 304 gacctttcttagatagaggtctgggcagatggctcagtgtgtgagagcacctgctgtgga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gacctttcttagatagaggtctgggcagatggctcagtgtgtgagagcacctgctgtgga 161
Query: 364 agcaaggggacctgagtcgaaatctccgacaatcatataagagaacagctcacgtccact 423
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 160 agcaaggggacctgagtcgaaatctccaacaatcatataagagaacagctcacgtccact 101
Query: 424 cacaagtgagtgcataccaccaggcatgtatccttttgggtctgggttacctcactcaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cacaagtgagtgcataccaccaggcatgtatccttttgggtctgggttacctcactcaga 41
Query: 484 atgatagtttctagctccatccatttgcctacaaattt 521
||||||||||||| ||| |||||||||||||||||||
Sbjct: 40 atgatagtttctaactctgtccatttgcctacaaattt 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 988
Length adjustment: 10
Effective length of query: 579
Effective length of database: 978
Effective search space: 566262
Effective search space used: 566262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_l11.g1 MSMg01no424_l11.g1 CHROMAT_FILE:
MSMg01no424_l11.g1 PHD_FILE: MSMg01no424_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:44 2005
(530 letters)
>mm_chr10_94801431_94802359
Length = 929
Score = 994 bits (514), Expect = 0.0
Identities = 526/530 (99%), Gaps = 1/530 (0%)
Strand = Plus / Plus
Query: 1 caccgtgtctctcatatctgaaatgtgttcaacatatcaaaagatttttacatgtaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccgtgtctctcatatctgaaatgtgttcaacatatcaaaagatttttacatgtaagca 260
Query: 61 tcacacagtagcatcttagtggttttttagttttatgttactgccttattttttttctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacacagtagcatcttagtggttttttagttttatgttactgccttattttttttctca 320
Query: 121 ttttcaccttttattttcatttctggtaggttgagagaccgtcattgagtgcagaacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcaccttttattttcatttctggtaggttgagagaccgtcattgagtgcagaacttc 380
Query: 181 ttattgaggttttgagggatcagtgtcctcaccagattagccaggcttgtgtgaatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattgaggttttgagggatcagtgtcctcaccagattagccaggcttgtgtgaatattt 440
Query: 241 tgtttgaaaaatgactctgtgtaattttgaacattattattgggcttggcttgcctgata 300
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggctggaaaatgactctgtgtaattttgaacattattattgggcttggcttgcctgata 500
Query: 301 ccaccatttcagattatgcatttttttcaggtttatttgatttatatttatgtgtctgtg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 ccaccatttcagattatgcatttttt-caggtttatttgatttatatttatgtgtctgtg 559
Query: 361 tgtgtgaatgccacacacacgtagatacccaagggatctagaagtttcatgctgtggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtgtgaatgccacacacacgtagatacccaagggatctagaagtttcatgctgtggtct 619
Query: 421 catccctgaagcttatccaggtcagatttctggagctgaagttacaggcagttgtgggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catccctgaagcttatccaggtcagatttctggagctgaagttacaggcagttgtgggcc 679
Query: 481 ccttagcatgagtgtcagaacagacctcagggcctctggaagaacagcaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccttagcatgagtgtcagaacagacctcagggcctctggaagaacagcaa 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 929
Length adjustment: 10
Effective length of query: 520
Effective length of database: 919
Effective search space: 477880
Effective search space used: 477880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
