Query= MSMg01no426_n10.b1 MSMg01no426_n10.b1 CHROMAT_FILE:
MSMg01no426_n10.b1 PHD_FILE: MSMg01no426_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:31 2005
(506 letters)
>mm_chr10_127400167_127401075
Length = 909
Score = 930 bits (481), Expect = 0.0
Identities = 498/505 (98%), Gaps = 3/505 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttaatatatctttaaaaagtactaaaaaaaaaaaaa---gacagcagatgaa 61
|||||||||||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattcttttaatagatatttaaaaagtactaaaaaaaaaaaaaaaagacagcagatgaa 264
Query: 62 ttttgcttacttagtgaccttaagatcacccacgttctcactcttcttgtccctaaatct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttgcttacttagtgaccttaagatcacccacgttctcactcttcttgtccctaaatct 324
Query: 122 aagcagtgaaatgtaaaactactttatagagccaaccccttcacattacatctgagaccc 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 aagcagtgaaatgtaaaactactttatagagccaaccccttcacgttacatctgagaccc 384
Query: 182 cacaggaatgaatatataccccatactataaatctggtcagatcaaatggggagttccaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacaggaatgaatatataccccatactataaatctggtcagatcaaatggggagttccaa 444
Query: 242 agttctagtgcagagcctcatacacttgctttgctaagtatacacgatatatctgtcaac 301
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 agttctagtgcagagcctcatacacttgctttgctaagtagacacgatatatctgtcaac 504
Query: 302 ttgccttctaaatacttgattatgactatagatcagaactactgtcatgtctggccagag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgccttctaaatacttgattatgactatagatcagaactactgtcatgtctggccagag 564
Query: 362 aatcttcttttagctgtgagcagtggtaactgcagattcctaactgctcaactggctaag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatcttcttttagctgtgagcagtggtaactgcagattcctaactgctcaactggctaag 624
Query: 422 aatacgtgactatcctcagccataaatgtggcctctctattgtcctacactggctagttt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatacgtgactatcctcagccataaatgtggcctctctattgtcctacactggctagttt 684
Query: 482 taaatgaacttgacacaaactggag 506
|||||||||||||||||||||||||
Sbjct: 685 taaatgaacttgacacaaactggag 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 909
Length adjustment: 10
Effective length of query: 496
Effective length of database: 899
Effective search space: 445904
Effective search space used: 445904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_n10.g1 MSMg01no426_n10.g1 CHROMAT_FILE:
MSMg01no426_n10.g1 PHD_FILE: MSMg01no426_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:31 2005
(477 letters)
>mm_chr10_127546817_127547691
Length = 875
Score = 891 bits (461), Expect = 0.0
Identities = 473/477 (99%), Gaps = 2/477 (0%)
Strand = Plus / Minus
Query: 1 tttccttggagggtctgactgaattctccagtccccacccacctctttgcttagtgccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tttccttggagggtctgactgaattctccagtccccacccacctctttgcttagtgccta 616
Query: 61 cttggccctacagtggcaccagaagggacagcctccacctcactgccacatgcagatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cttggccctacagtggcaccagaagggacagcctccacctcactgccacatgcagatcca 556
Query: 121 gcactttgcgctgagctaagaatagaatttgcagtcaccacagtgacaagattccagctc 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gcactttgcactgagctaagaatagaatttgcagtcaccacagtgacaagattccagctc 496
Query: 181 agaaggctggggttagcccctccccataggcccaggagggtaatatgcagtaggtaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agaaggctggggttagcccctccccataggcccaggagggtaatatgcagtaggtaaaaa 436
Query: 241 tctttgcatgactctagtgctgcagaaagaatctagctctaaaaacagttatctttgagt 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tctttgcatgac-c-agtgctgcagaaagaatctagctctaaaaacagttatctttgagt 378
Query: 301 ttgcaaaaaacaacaataaataaaagggactaagatactaagaagctgcaagcaggtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttgcaaaaaacaacaataaataaaagggactaagatactaagaagctgcaagcaggtgta 318
Query: 361 tggttggggaaatcctacagcagggaggtaggtctgtatttgtggaaatcccaatgaaat 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 317 tggttggggaaatcctacagcagggaggtaggtatgtatttgtggaaatcccaatgaaat 258
Query: 421 agaggggtttgtgtttatctccaagtgtcctataactgacaggaggaaagcaagtac 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agaggggtttgtgtttatctccaagtgtcctataactgacaggaggaaagcaagtac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 875
Length adjustment: 10
Effective length of query: 467
Effective length of database: 865
Effective search space: 403955
Effective search space used: 403955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
