Query= MSMg01no428_a01.b1 MSMg01no428_a01.b1 CHROMAT_FILE:
MSMg01no428_a01.b1 PHD_FILE: MSMg01no428_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:02 2005
(404 letters)
>mm_chr10_119142361_119143168
Length = 808
Score = 735 bits (380), Expect = 0.0
Identities = 392/398 (98%), Gaps = 4/398 (1%)
Strand = Plus / Minus
Query: 4 ggaattctttctatactgacctgaagccctgtaactggcggtttgaggttacaagcatga 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggaattctttctagactgacctgaagccctgtaactggcggtttgaggttacaagcatga 504
Query: 64 aggaacctttgaacagtgcctcgagggagaaaggcaaagggctaggagttgtggaatagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggaacctttgaacagtgcctcgagggagaaaggcaaagggctaggagttgtggaatagt 444
Query: 124 aggcgacatacttatcacaacagcataaatggagggctcactcttttcgaaccagagcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aggcgacatacttatcacaacagcataaatggagggctcactcttttcgaaccagagcac 384
Query: 184 cacttgctaaaccttatagtcattctgctatgtaaactgttactgtgtgaagtaaataac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cacttgctaaaccttatagtcattctgctatgtaaactgttactgtgtgaagtaaataac 324
Query: 244 acaagtttctgtgtagggcgggagtgtgaatgcgtctaactctacagctttgtggcaaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acaagtttctgtgtagggcgggagtgtgaatgcgtctaactctacagctttgtggcaaga 264
Query: 304 at----taagagcagggtgctgtccttggtgctgaagtttgaaaatgacagtgttgcaag 359
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attaactaagagcagggtgctgtccttggtgctgaagtttgaaaatgacagtgttgcaag 204
Query: 360 gtgtgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgt 397
|||||||||| |||||||||||||||||||||||||||
Sbjct: 203 gtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 808
Length adjustment: 9
Effective length of query: 395
Effective length of database: 799
Effective search space: 315605
Effective search space used: 315605
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_a01.g1 MSMg01no428_a01.g1 CHROMAT_FILE:
MSMg01no428_a01.g1 PHD_FILE: MSMg01no428_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:02 2005
(532 letters)
>mm_chr10_118981711_118982646
Length = 936
Score = 982 bits (508), Expect = 0.0
Identities = 530/544 (97%), Gaps = 12/544 (2%)
Strand = Plus / Plus
Query: 1 ctttgagaattggaatgaatgaagctctgaaagccctcccctcaaaactccgtgtgccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctttgagaattggaatgaatgaagctctgaaagccctcccctcaaaactccgtgtgccca 252
Query: 61 tacagaaaatctgcatgagagttcaggggtctcgtggtctcagggagccgtctgtggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tacagaaaatctgcatgagagttcaggggtctcgtggtctcagggagccgtctgtggatc 312
Query: 121 tcagccgcaagtga--------ggacatgtcagtaacaacgtgtggctccaaatgctgcc 172
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcagccgcaagtgactgaatgaggacatgtcagtaacaacgtgtggctccaaatgctgcc 372
Query: 173 atgggaacaatatttagggtgggagcctgtgaccactggctaaaaagcctaaagcttgaa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atgggaacaatatttagggtgggagcctgtgaccactggctaaaaagcctaaagcttgaa 432
Query: 233 gggcaggccagggtatctcctgtgtgaaaagtggaagtttgcttcgggttgtttcagagg 292
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gggcaggccagggcatctcctgtgtgaaaagtggaagtttgcttcgggttgtttcagagg 492
Query: 293 tggctagtcctgtgctgtagccgctgaccacatgctgttatgtagttaaaattaaagaat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tggctagtcctgtgctgtagccgctgaccacatgctgttatgtagttaaaattaaagaat 552
Query: 353 tctgttctctatgggcgggaagaatgtttcaactggcaaatgactgtgtatgttaatggc 412
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 553 tctgttctctatgggcgggaagaatgtttcaattggcaaatgactgtgtatgttaatggc 612
Query: 413 gtctgaattcgacagcaagaatatagactatgtcacccttgtagagaaggtttttctttt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtctgaattcgacagcaagaatatagactatgtcacccttgtagagaaggtttttctttt 672
Query: 473 ctttttttttt----gagtcgggggacagagctactctaaaattggggaccttaaatgga 528
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cttttttttttttttgagtcgggggacagagctactctaaaattggggaccttaaatgga 732
Query: 529 gtga 532
||||
Sbjct: 733 gtga 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 936
Length adjustment: 10
Effective length of query: 522
Effective length of database: 926
Effective search space: 483372
Effective search space used: 483372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
