Query= MSMg01no428_c23.b1 MSMg01no428_c23.b1 CHROMAT_FILE:
MSMg01no428_c23.b1 PHD_FILE: MSMg01no428_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:17 2005
(590 letters)
>mm_chr10_102214695_102215684
Length = 990
Score = 1096 bits (567), Expect = 0.0
Identities = 585/591 (98%), Gaps = 1/591 (0%)
Strand = Plus / Minus
Query: 1 agaacagagttcacaattcaagtcatttaccaaggaaacaaaaaaattaaaaacatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 972 agaacagagttcacaattcaagtcatttaccaaggaaacaaaaaaattaaaaatatacct 913
Query: 61 aggtggagttatacatagattttaggggcttttcaagtatatgctcaaagaactgagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 aggtggagttatacatagattttaggggcttttcaagtatatgctcaaagaactgagaat 853
Query: 121 atgtgaactgaaaatat-aaaatctaaagtaaaaaaatgaacaaattatttataaaaatt 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 atgtgaactgaaaatataaaaatctaaagtaaaaaaatgaacaaattatttataaaaatt 793
Query: 180 taccttacttttgaacactttaacacattatttgtagatttttcccaagtagccttgtag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 taccttacttttgaacactttaacacattatttgtagatttttcccaagtagccttgtag 733
Query: 240 cctcaatagaatttctgtttgttgtaatgcttattttgtctatttataaacacccataat 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cctcaatagaatttctgacagttgtaatgcttattttgtctatttataaacacccataat 673
Query: 300 tcaagacttaaagaaaaacaaatagggcataaaaatgttaaaacagattttgttagagac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tcaagacttaaagaaaaacaaatagggcataaaaatgttaaaacagattttgttagagac 613
Query: 360 acaaaaaatgtttaaatacatttaagaggaaaatagttatccctagtttttcccattaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 acaaaaaatgtttaaatacatttaagaggaaaatagttatccctagtttttcccattaaa 553
Query: 420 attcaaccaggatatgttggaggctaagtactacattgatgtgtaaattatgcagaatat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 attcaaccaggatatgttggaggctaagtactacattgatgtgtaaattatgcagaatat 493
Query: 480 actacataacgctttcatgctacgcacataattcttaatacagtaatagccattattttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 actacataacgctttcatgctacgcacataattcttaatacagtaatagccattattttc 433
Query: 540 atgagacagaggcaccaaaatggtcctcccctcctctctatgtgaacaatt 590
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 atgagacagaggcaccaaaatggtcctcccctcctccctatgtgaacaatt 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_c23.g1 MSMg01no428_c23.g1 CHROMAT_FILE:
MSMg01no428_c23.g1 PHD_FILE: MSMg01no428_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:17 2005
(527 letters)
>mm_chr10_102092776_102093702
Length = 927
Score = 977 bits (505), Expect = 0.0
Identities = 522/529 (98%), Gaps = 4/529 (0%)
Strand = Plus / Plus
Query: 1 tccatagtgatagacttcaactgaaactgaaatcttactcaattgaactagctgaatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatagtgatagacttcaactgaaactgaaatcttactcaattgaactagctgaatgac 260
Query: 61 acagttttgtacaactatgtggtaattcctgtgaattatttattgaaataataattcttt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagttttgtacaactatgtgataattcctgtgaattatttattgaaataataattcttt 320
Query: 121 taaaattaaatgctaagcaattttttatcaaactatatgtatggtgaatatttaaagagg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaattaaatgctaagcaatcttttatcaaactatatgtatggtgaatatttaaagagg 380
Query: 181 tcactgggacatgttttacttacttgtgaacaatgtgagctggagaggagatgccaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcactgggacatgttttacttacttgtgaacaatgtgagctggagaggagatgccaaaca 440
Query: 241 tgagtggcacattttaaacttgaaaaatattaaggtcaggattttacaagatgactgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtggcacattttaaacttgaaaaatattaaggtcaggattttacaagatgactgctt 500
Query: 301 tgcacttcagagttggaaacagaagcaattcatcacaacagtataaaaactataacataa 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 tgcacttcagagttggaaacagaagcgattcatcacaacagtataaaaactataacataa 560
Query: 361 aagagaaacagcttcatagctatggactagaaatggaaaacaagtttacaccccagagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagagaaacagcttcatagctatggactagaaatggaaaacaagtttacaccccagagac 620
Query: 421 aatacactggccatctgtttgcccatgaatacccatccagttatttaaaggcaactctgt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 aatacactggccatctgtttgcccatgaatacccatccagttatttaaaggcaact--gt 678
Query: 481 taccatgggaacagctgtattatattttttt--cactcttctaacaggt 527
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 679 taccatgggaacagctgtattatatttttttttcactcttctaacaggt 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
