Query= MSMg01no428_p06.b1 MSMg01no428_p06.b1 CHROMAT_FILE:
MSMg01no428_p06.b1 PHD_FILE: MSMg01no428_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:17 2005
(241 letters)
>mm_chr10_3672167_3672808
Length = 642
Score = 383 bits (198), Expect = e-111
Identities = 228/238 (95%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 2 cttccttgattttgtctcccaataaaactcttgtgtgtggtttattgtgcagtgtgattg 61
|||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 439 cttccttggttttgtctcccagtaaaactcttgtgtgtggtttatagtgcagtgtgattg 380
Query: 62 tgtggtattccttgacttctgactgccaggatacctttttgagcagagctgtaacacttt 121
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 tgtggtattccttgacttctgactgccaggatacctttctgagcagagctgtaacacttt 320
Query: 122 cagaggaacagggctttagctggggaaccctttcctgctgtagtagagctgtattacttt 181
||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||||
Sbjct: 319 cagaggaacagagctttagctggggaacccttacctgctgtagcagagctgtagcacttt 260
Query: 182 cactggaaaaatcttcccctgcaacagagttgtaacatttatgaaagggaac-ttttc 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 259 cactggaaaaatcttcccctgcaacagagttgtaacatttatgaaagggaaccttttc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_p06.g1 MSMg01no428_p06.g1 CHROMAT_FILE:
MSMg01no428_p06.g1 PHD_FILE: MSMg01no428_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:17 2005
(504 letters)
>mm_chr10_3545336_3546238
Length = 903
Score = 890 bits (460), Expect = 0.0
Identities = 493/504 (97%), Gaps = 1/504 (0%)
Strand = Plus / Plus
Query: 1 caagttttcttttagtcattagctgctgaggaacagccccctaaacatttttctgttctg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 caagttttcttttagtcattagctgctgaggaacagccctctaaacatttttctgttctg 260
Query: 61 ttcttttcatttctatgtttttctcaatactgccaggaattgaactcagggactcagagt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ttcttttcatttctatgtttttctcaatactgccaggaattaaactcagggactcagagt 320
Query: 121 tgcctgctaagcttccttccactgaggtttaggctcagcctagcactgtgatcttcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctgctaagcttccttccactgaggtttaggctcagcctagcactgtgatcttcacaa 380
Query: 181 accagaaacaggacatggaaagcaaaaggttaaaaatgattgcaacattaacataatata 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accagaaacaggacacagaaagcaaaaggttaaaaatgattgcaacattaacataatata 440
Query: 241 atctggttctataatgtatatatatgcaaaggagtgcacacactttaatatgaataaaaa 300
|||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 atctgg-ccaataatgtatatatatgcaaaggagtggacacactttaatatgaataaaaa 499
Query: 301 agaacaagaaaggctaaatatcctgagatgaggaaggactgggtgcacatcacagatccg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaacaagaaaggctaaatatcctgagatgaggaaggactgggtgcacatcacagatcca 559
Query: 361 agtggggaaactggagactaagctgattggtaccccaggtctagttctttttgggatgtg 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtggggaaactggagactaagttgattggtaccccaggtctagttctttttgggatgtg 619
Query: 421 ggtttggtagttaattaaatacaatacatttgatagtaaggtgtaaaactgaatgtgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggtttggtagttaattaaatacaatacatttgatagtaaggtgtaaaactgaatgtgaag 679
Query: 481 ttatacatccttcatctctaatgc 504
||||||||||| ||||||||||||
Sbjct: 680 ttatacatcctccatctctaatgc 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space: 441142
Effective search space used: 441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
