Query= MSMg01no429_g08.b1 MSMg01no429_g08.b1 CHROMAT_FILE:
MSMg01no429_g08.b1 PHD_FILE: MSMg01no429_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:52 2005
(510 letters)
>mm_chr10_59937606_59938516
Length = 911
Score = 743 bits (384), Expect = 0.0
Identities = 411/426 (96%), Gaps = 13/426 (3%)
Strand = Plus / Minus
Query: 4 ggaattcac---cattaattactcttaaagagggaaaatcaatcatttggagcggagata 60
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggaattcaccagca--aattactcttaaagagggaaaatcaatcatttggagcggagata 363
Query: 61 agctgaaggcgaggcagcctgggattgatcccatctgtgcaggcgtgtgtggaattcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agctgaaggcgaggcagcctgggattgatcccatctgtgcaggcgtgtgtggaattcgat 303
Query: 121 gggtaacctggggcaccaaggagaagagaggagagatgaaaggagagagaggctcttagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gggtaacctggggcaccaaggagaagagaggagagatgaaaggagagagaggctcttagc 243
Query: 181 ctgtctgggccagagtaaccagggggctcacatgtctccttgtgaagacagggcagtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctgtctgggccagagtaaccagggggctcacatgtctccttgtgaagacagggcagtcta 183
Query: 241 agaccaatgagctggaggatttggttgcat----attttgagacacttcgtggtttttag 296
|||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 182 agaccaatgagctggaggatttggttgcatggcaa----gagacacttcgtggtttttag 127
Query: 297 atggtcatcttctccctgtatccacacatagcagaaagggtaaagttggacctggggttc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggtcatcttctccctgtatccacacatagcagaaagggtaaagttggacctggggttc 67
Query: 357 ctttcatatgtgccatcaggagctggcatcctgatcaggaagattccacctacccaccca 416
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 66 ctttcatatgtgccatcaggagctggcatcctgatcaggaagattccacccacccaccca 7
Query: 417 aaccac 422
||||||
Sbjct: 6 aaccac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_g08.g1 MSMg01no429_g08.g1 CHROMAT_FILE:
MSMg01no429_g08.g1 PHD_FILE: MSMg01no429_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:52 2005
(245 letters)
>mm_chr10_59793465_59794109
Length = 645
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 ctgggctaactgtgaactcccagcaatcctcctgcttagccttgcaatggctggccagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggctaactgtgaactcccagcaatcctcctgcttagccttgcaatggctggccagga 260
Query: 61 gctgggtgtgtgctagtactcatggattctgattaactttagaactgctgctgctcacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gctgggtgtgtgctagtactcatggattctgattaactttagaactgctgctgctcatgc 320
Query: 121 tttggggtccagtttcttcatgaccacaaagaagtctctgccccagtctagaacccagat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggggtccagtttcttcatgaccacaaagaagtctctgccccagtctagaacccagag 380
Query: 181 ctcctcaatgggcctccggtaggaagggctgggagccctgggcagatccaaccctaccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcctcaatgggcctccggtaggaagggctgggagccctgggcagatccaaccctaccgt 440
Query: 241 ggc 243
|||
Sbjct: 441 ggc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
