Query= MSMg01no429_h05.b1 MSMg01no429_h05.b1 CHROMAT_FILE:
MSMg01no429_h05.b1 PHD_FILE: MSMg01no429_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:56 2005
(365 letters)
>mm_chr10_129132380_129133142
Length = 763
Score = 636 bits (329), Expect = 0.0
Identities = 350/357 (98%), Gaps = 2/357 (0%)
Strand = Plus / Plus
Query: 5 gaattcctggtgttctaatttaaaaaacgaaatatcaaatgtaatattttaattaaaaac 64
|||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggtggtctaattt-aaaaatgaaatatcaaatgtaatattttaattaaaaac 263
Query: 65 ttaaagtttaaactaacacatatttatagaagtgagcatataatagctatagtagtataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttaaagtttaaactaacacatatttatagaagtgagcatataatagctatagtagtataa 323
Query: 125 agggacatatagaatggtttttataattcccactggactcctattttgtttacattttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agggacatatagaatggtttttataattcccactggactcctattttgtttacattttaa 383
Query: 185 attagccaatttaatgctctgtaatgtagactttgtgatagtttgtctatgtttttactc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attagccaatttaatgctctgtaatgtagactttgtgatagtttgtctatgtttttactc 443
Query: 245 aaaaaatatatatgtacttacataccaaattttattaactatatccaattctacctctat 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 444 aaaaa-tatatatgtacttacataccaaattttattaactatatccaattctatctctat 502
Query: 305 catctctttcactacatatatgtaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 361
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 503 catctctttcactacatatatgtaagtgtttgtatgtgtgtgtgtgtgtgtgtgtgt 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 763
Length adjustment: 9
Effective length of query: 356
Effective length of database: 754
Effective search space: 268424
Effective search space used: 268424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_h05.g1 MSMg01no429_h05.g1 CHROMAT_FILE:
MSMg01no429_h05.g1 PHD_FILE: MSMg01no429_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:57 2005
(353 letters)
>mm_chr10_129294763_129295514
Length = 752
Score = 675 bits (349), Expect = 0.0
Identities = 352/353 (99%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 1 catacttttaatatactgtttacatgtattggtaattcccatatcatactcctcaattgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catacttttaatatactgtttacatgtattggtaattcccatatcatactcctcaattgg 493
Query: 61 cacagccacgtccattggaaatagcaaatcataaagccagcactgctacttgacacagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cacagccacgtccattggaaatagcaaatcataaagccagcactgctacttgacacagtt 433
Query: 121 ccagcaaagctgagcagattgctccaatccctgttcttccttctctaacttttgggtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccagcaaagctgagcagattgctccaatccctgttcttccttctctaacttttgggtttt 373
Query: 181 ggtctttgcatgttgcatttttggagggaactttctacaatatgattcatctcttttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggtctttgcatgttgcatttttggagggaactttctacaatatgattcatctcttttcct 313
Query: 241 gagaaaaattatgtctgaatctttttaggaaaatcttaaaattgactttgtatggccaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gagaaaaattatgtctgaatctttttaggaaaatcttaaaattgactttgtatggccaat 253
Query: 301 atttggagtcttccttttgctctggagatcattaacatacaaaaaaatataac 353
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 252 atttggagtcttccttttgctctggagatcattaacata-aaaaaaatataac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 752
Length adjustment: 9
Effective length of query: 344
Effective length of database: 743
Effective search space: 255592
Effective search space used: 255592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
