XXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCCTTCT
TTAGATAACACTAGCCTTGAACTCACAGAGATCTGCCTTCCTCTGACTCC
CAAGTGCTGGGCTCAAAGGCGTGTGCCACTGCTGCCCAGCTCCCAACTCC
ATTTTTAAGCCAACATTTGTCTTGATGTGAAATGATCTTTCTGAACATAA
GTACTTCTCTTTATGGGCACCTTGGCTTCCCAGAAATTAACCTTATTTGA
GTACTGTGATAGGTGCTTTGATGGAAAGAAATAGGCATGTATGTGTGTGT
GTTTTAGAGAGATTTTGTCAAAATTGGTTAATTGCTCACACTCAGTGTTT
TCTGGAACCTTTCCTCAGGCTGCATTTCCAGCTGTATCAAACTGAGAAAG
CAACTAGATTCCCAAACTTCAGCTGTCTGGGATTCCTGACCATGGTAACA
ATGAAATCCGTTGCTATTTCTCCTGACACCCTGTTTTTCCCACCACTATA
TCATCGTCATCACATCTGAGCCAGGACAAACCACCCTTTAAGTTGCTTTT
CTTCAATATTTTCTCACGACAGGAGAAAAGTAAGTCATAAAATCCACTCT
CAACACTAGAGTCTTCCACTATCCATATGTCTTTGCCCCTTTCAAGTCAC
TAAGTTATTACCAGTGCCCTCCCAACTTTGCAGAGAACTTGAGGCTTTAA
AACACAAACTCTTCCACTGATTTTTTTCCACTCTCTTAACTCCC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCTCTGTGATGAACAGCAATGTGGAAGTGGA
AGTTCAATAAACCTCTCCTCCCCAACTTGCTCTTGGAGCATGATGTTTTC
ATCACAGCAGTGGAGATCCCAACTGAGACAGCAAGTATGGGCGCAATGCT
CTTGGGGGCTTCATGTCTCACAAAATCCTAAGCTCCTCCTCCTCTGGAGC
AAAGCTTGAACAATAGAAAGGCCTGGAAACGACAGCACCTGGGCACCAGA
CAGGAGGGAAGACAGGTCTTGCACTCAGAGTAGAGAGACACCCGCCGAGG
CAACCCCGGGTAAGCGCTGGCAAGTGATGGGGTTTTAAAGAGCACCCACT
CCTTCCCAAAGCCAGTTTGGGAAAGAATATGAGTTCCAGGCCTGGTCTAT
AGCTTTGAATGAAGACACTAACGGCTATAATCCATCTCTGTTTTAAAGCA
GGATCCAGAGATTTCTGTCATAAGGAGAGTCGCTTTGGCTAACCCACAGG
GTTTTGGATGAGTCTTTTGATCTCTGTATGTTATTCAGGTTCAACGCCCT
CCTCTCCCAGCAGCCCACGAATGATAACCCTTGCATAGAGATTGGCTACT
TTAATTATCCCTTCTTTTATGCGACCCCCCATCTTTACCCTTTATCCCCC
ATTTTTCTCCCAACCCCTCTTTCTTN

Query= MSMg01no429_n20.b1 MSMg01no429_n20.b1 CHROMAT_FILE:
MSMg01no429_n20.b1 PHD_FILE: MSMg01no429_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:28 2005
         (567 letters)



>mm_chr10_85246886_85247852
          Length = 967

 Score = 1058 bits (547), Expect = 0.0
 Identities = 550/551 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattccttctttagataacactagccttgaactcacagagatctgccttcctctgact 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggaattccttctttagataacactagccttgaactcacagagatctgccttcctctgact 492

                                                                       
Query: 66  cccaagtgctgggctcaaaggcgtgtgccactgctgcccagctcccaactccatttttaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cccaagtgctgggctcaaaggcgtgtgccactgctgcccagctcccaactccatttttaa 432

                                                                       
Query: 126 gccaacatttgtcttgatgtgaaatgatctttctgaacataagtacttctctttatgggc 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gccaacatttgtcttgatgtgaaatgatctttctgaacataagtacttctctttatgggc 372

                                                                       
Query: 186 accttggcttcccagaaattaaccttatttgagtactgtgataggtgctttgatggaaag 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accttggcttcccagaaattaaccttatttgagtactgtgataggtgctttgatggaaag 312

                                                                       
Query: 246 aaataggcatgtatgtgtgtgtgttttagagagattttgtcaaaattggttaattgctca 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaataggcatgtatgtgtgtgtgttttagagagattttgtcaaaattggttaattgctca 252

                                                                       
Query: 306 cactcagtgttttctggaacctttcctcaggctgcatttccagctgtatcaaactgagaa 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cactcagtgttttctggaacctttcctcaggctgcatttccagctgtatcaaactgagaa 192

                                                                       
Query: 366 agcaactagattcccaaacttcagctgtctgggattcctgaccatggtaacaatgaaatc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agcaactagattcccaaacttcagctgtctgggattcctgaccatggtaacaatgaaatc 132

                                                                       
Query: 426 cgttgctatttctcctgacaccctgtttttcccaccactatatcatcgtcatcacatctg 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cgttgctatttctcctgacaccctgtttttcccaccactatatcatcgtcatcacatctg 72

                                                                       
Query: 486 agccaggacaaaccaccctttaagttgcttttcttcaatattttctcacgacaggagaaa 545
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 71  agccaggacaaaccaccctttaggttgcttttcttcaatattttctcacgacaggagaaa 12

                      
Query: 546 agtaagtcata 556
           |||||||||||
Sbjct: 11  agtaagtcata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no429_n20.g1 MSMg01no429_n20.g1 CHROMAT_FILE:
MSMg01no429_n20.g1 PHD_FILE: MSMg01no429_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:28 2005
         (452 letters)



>mm_chr10_85109738_85110589
          Length = 852

 Score =  812 bits (420), Expect = 0.0
 Identities = 444/452 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctctgtgatgaacagcaatgtggaagtggaagttcaataaacctctcctccccaacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctctgtgatgaacagcaatgtggaagtggaagttcaataaacctctcctccccaacttg 260

                                                                       
Query: 61  ctcttggagcatgatgttttcatcacagcagtggagatcccaactgagacagcaagtatg 120
           ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||
Sbjct: 261 ctcttggagcatgatgtttccatcacagcactggagaccccaactgagacagcaagtatg 320

                                                                       
Query: 121 ggcgcaatgctcttgggggcttcatgtctcacaaaatcctaagctcctcctcctctggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcgcaatgctcttgggggcttcatgtctcacaaaatcctaagctcctcctcctctggag 380

                                                                       
Query: 181 caaagcttgaacaatagaaaggcctggaaacgacagcacctgggcaccagacaggaggga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagcttgaacaatagaaaggcctggaaacgacagcacctgggcaccagacaggaggga 440

                                                                       
Query: 241 agacaggtcttgcactcagagtagagagacacccgccgaggcaaccccgggtaagcgctg 300
           || |||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcagggcaggcactcagagtagacagacacccgccgaggcaaccccgggtaagcgctg 500

                                                                       
Query: 301 gcaagtgatggggttttaaagagcacccactccttcccaaagccagtttgggaaagaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaagtgatggggttttaaagagcacccactccttcccaaagccagtttgggaaagaata 560

                                                                       
Query: 361 tgagttccaggcctggtctatagctttgaatgaagacactaacggctataatccatctct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagttccaggcctggtctatagctttgaatgaagacactaacggctataatccatctct 620

                                           
Query: 421 gttttaaagcaggatccagagatttctgtcat 452
           ||||||||||||||||||||||||||||||||
Sbjct: 621 gttttaaagcaggatccagagatttctgtcat 652


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)