Query= MSMg01no430_e13.b1 MSMg01no430_e13.b1 CHROMAT_FILE:
MSMg01no430_e13.b1 PHD_FILE: MSMg01no430_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:03 2005
(273 letters)
>mm_chr10_120101566_120102239
Length = 674
Score = 501 bits (259), Expect = e-146
Identities = 268/271 (98%), Gaps = 1/271 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagagtgc-tgctcccatggaaatggtgtcatccatagtaggagttagtctcca 62
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggaattcagagtgcatgttcccatggaaatggtgtcatccatagtaggagttagtctcca 415
Query: 63 ggctgtccttcctccgccatttgactctctatacagcaggccgcatcgtactttacaatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggctgtccttcctccgccatttgactctctatacagcaggccgcatcgtactttacaatt 355
Query: 123 attgttttaattgtaatatcactaattaattggctccaaataaccaacagttttagacag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 attgttttaattgtaatatcactaattaattggctccaaataaccaacagttttagacag 295
Query: 183 catttgaaatacgaatgtctagagaacaagtttcagctagagatatttgaggtggtaggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 catttgaaatacgaatgtctagagaacaagtttcagctagagatatttgaggtggtaggt 235
Query: 243 ggagaccttcttgtcttttctgtagagactg 273
|| ||||||||||||||||||||||||||||
Sbjct: 234 ggggaccttcttgtcttttctgtagagactg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_e13.g1 MSMg01no430_e13.g1 CHROMAT_FILE:
MSMg01no430_e13.g1 PHD_FILE: MSMg01no430_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:03 2005
(238 letters)
>mm_chr10_119930165_119930802
Length = 638
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%)
Strand = Plus / Plus
Query: 1 tacagctggttgtagtaacgatttcacaactgtgagtacactaaaaactagtgaactggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacagctggttgtagtaacgatttcacaactgtgagtacactaaaaactagtgaactggg 260
Query: 61 cgctctaaacaagcacattgtttgagatgtaaacggaattttaatatagtcatttaaagc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgctctaaacaggcacattgtttgagatgtaaacggaattttaatatagtcatttaaagc 320
Query: 121 agtgaacgaggttggccctccctcaaggcacctgctgtgacctgggactcatcagaatca 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgaacaaggttggccctccctcaaggcacctgctgtgacctgggactcatcagaatca 380
Query: 181 cgctgtctctgtctcgccagatctggaccgtgactaatgggacactagactgagaagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgctgtctctgtctcgccagatctggaccgtgactaatgggacactagactgagaagt 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
