Query= MSMg01no430_i18.b1 MSMg01no430_i18.b1 CHROMAT_FILE:
MSMg01no430_i18.b1 PHD_FILE: MSMg01no430_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:26 2005
(204 letters)
>mm_chr10_111806345_111806947
Length = 603
Score = 348 bits (180), Expect = e-100
Identities = 198/204 (97%), Gaps = 1/204 (0%)
Strand = Plus / Minus
Query: 1 cactgagggtggtgctgagactaaagattgaggaagatattgctgtatccctaagtactt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cactgagcatggtgctgagactaaagattgaggaagatattgctgtatccctaagtactt 344
Query: 61 tatgaagatcatttatcagactgtaaaaaaaaatattaatggtattgtagatactacgaa 120
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||
Sbjct: 343 tatgaagatcatttatcagactgt-aaaaaaaatattaatgatattgtagatactacaaa 285
Query: 121 tttaggggtggctctcggtcttccaaagaatcacgtgtgaggtgacaaagtatgctgtgg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 284 tttaggggtggctctcggtcttccaaagaatcaagtgtgaggtgacaaagtatgctgtgg 225
Query: 181 ttgttaggggaggaagttgttagg 204
||||||||||||||||||||||||
Sbjct: 224 ttgttaggggaggaagttgttagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 603
Length adjustment: 8
Effective length of query: 196
Effective length of database: 595
Effective search space: 116620
Effective search space used: 116620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_i18.g1 MSMg01no430_i18.g1 CHROMAT_FILE:
MSMg01no430_i18.g1 PHD_FILE: MSMg01no430_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:27 2005
(385 letters)
>mm_chr10_111621315_111622099
Length = 785
Score = 704 bits (364), Expect = 0.0
Identities = 379/384 (98%)
Strand = Plus / Plus
Query: 1 catatcacctacatattcgcttcctgctttcaaacatgttctgtatcctaatacatcttt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatcacctacatatttgcttcctgctttcaaacatgttctgtatcctaatacatcttt 260
Query: 61 aatcttgaagattttgatttctctctctcttttcttttctaatctaaattttctcatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcttgaagattttgatttctctctctcttttcttttctaatctaaattttctcatctg 320
Query: 121 accaaagctgctttaacttttctccacagcaattctaagtttgaaactatttagtcctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaaagctgctttaacttttctccacagcaattctaagtttgaaactatttagtcctga 380
Query: 181 agtccccgggatgcccttgatccatttcgttcttttaactctgatatccactgtcagcca 240
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 agtcccggggatgcccttgatccattttgttcttttaactctgatatccactgtcagcca 440
Query: 241 agactcagtcctagcaaaatacgttgatttgtcctggtgcccactacttgttttgcctct 300
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 441 agactcagtcctagcaaaatacattgttttgtcctggtgcccactacttgttttgcctct 500
Query: 301 ttctatcttctggatagtttctttcagtccccactgggtttcattgagtctctattaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctatcttctggatagtttctttcagtccccactgggtttcattgagtctctattaacc 560
Query: 361 tttcattggcttatcatcaacctg 384
||||||||||||||||||||||||
Sbjct: 561 tttcattggcttatcatcaacctg 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
